Prediction of cardiac death after adenosine myocardial perfusion SPECT based on machine learning.


Journal

Journal of nuclear cardiology : official publication of the American Society of Nuclear Cardiology
ISSN: 1532-6551
Titre abrégé: J Nucl Cardiol
Pays: United States
ID NLM: 9423534

Informations de publication

Date de publication:
10 2019
Historique:
received: 22 09 2017
accepted: 19 02 2018
pubmed: 16 3 2018
medline: 21 10 2020
entrez: 16 3 2018
Statut: ppublish

Résumé

We developed machine-learning (ML) models to estimate a patient's risk of cardiac death based on adenosine myocardial perfusion SPECT (MPS) and associated clinical data, and compared their performance to baseline logistic regression (LR). We demonstrated an approach to visually convey the reasoning behind a patient's risk to provide insight to clinicians beyond that of a "black box." We trained multiple models using 122 potential clinical predictors (features) for 8321 patients, including 551 cases of subsequent cardiac death. Accuracy was measured by area under the ROC curve (AUC), computed within a cross-validation framework. We developed a method to display the model's rationale to facilitate clinical interpretation. The baseline LR (AUC = 0.76; 14 features) was outperformed by all other methods. A least absolute shrinkage and selection operator (LASSO) model (AUC = 0.77; p = .045; 6 features) required the fewest features. A support vector machine (SVM) model (AUC = 0.83; p < .0001; 49 features) provided the highest accuracy. LASSO outperformed LR in both accuracy and simplicity (number of features), with SVM yielding best AUC for prediction of cardiac death in patients undergoing MPS. Combined with presenting the reasoning behind the risk scores, our results suggest that ML can be more effective than LR for this application.

Sections du résumé

BACKGROUND
We developed machine-learning (ML) models to estimate a patient's risk of cardiac death based on adenosine myocardial perfusion SPECT (MPS) and associated clinical data, and compared their performance to baseline logistic regression (LR). We demonstrated an approach to visually convey the reasoning behind a patient's risk to provide insight to clinicians beyond that of a "black box."
METHODS
We trained multiple models using 122 potential clinical predictors (features) for 8321 patients, including 551 cases of subsequent cardiac death. Accuracy was measured by area under the ROC curve (AUC), computed within a cross-validation framework. We developed a method to display the model's rationale to facilitate clinical interpretation.
RESULTS
The baseline LR (AUC = 0.76; 14 features) was outperformed by all other methods. A least absolute shrinkage and selection operator (LASSO) model (AUC = 0.77; p = .045; 6 features) required the fewest features. A support vector machine (SVM) model (AUC = 0.83; p < .0001; 49 features) provided the highest accuracy.
CONCLUSIONS
LASSO outperformed LR in both accuracy and simplicity (number of features), with SVM yielding best AUC for prediction of cardiac death in patients undergoing MPS. Combined with presenting the reasoning behind the risk scores, our results suggest that ML can be more effective than LR for this application.

Identifiants

pubmed: 29542015
doi: 10.1007/s12350-018-1250-7
pii: 10.1007/s12350-018-1250-7
pmc: PMC6138585
mid: NIHMS944988
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

1746-1754

Subventions

Organisme : NHLBI NIH HHS
ID : R01 HL089765
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL122484
Pays : United States

Commentaires et corrections

Type : CommentIn

Références

Am J Cardiol. 1997 Aug 15;80(4):426-33
pubmed: 9285653
Circ J. 2012;76(1):168-75
pubmed: 22104035
J Am Coll Cardiol. 1995 Nov 1;26(5):1202-8
pubmed: 7594033
J Am Coll Cardiol. 2004 Jan 21;43(2):200-8
pubmed: 14736438
J Am Coll Cardiol. 1993 Nov 1;22(5):1455-64
pubmed: 8227805
IEEE Signal Process Mag. 2010 Jul;27(4):25-38
pubmed: 25382956
Circulation. 2003 Sep 16;108(11):1404-18
pubmed: 12975245
Circulation. 2003 Jun 17;107(23):2900-7
pubmed: 12771008
Circulation. 1998 Feb 17;97(6):535-43
pubmed: 9494023
Am J Public Health. 1989 Mar;79(3):340-9
pubmed: 2916724
J Am Coll Cardiol. 2003 Apr 2;41(7):1125-33
pubmed: 12679212
J Stat Softw. 2012 Sep;50(11):1-23
pubmed: 25317082
J Nucl Med. 2013 Apr;54(4):549-55
pubmed: 23482666
IEEE Trans Med Imaging. 2002 Dec;21(12):1552-63
pubmed: 12588039
J Am Coll Cardiol. 2013 Mar 12;61(10):1054-65
pubmed: 23473411
JACC Cardiovasc Imaging. 2008 Mar;1(2):156-63
pubmed: 19356422
Biometrics. 1988 Sep;44(3):837-45
pubmed: 3203132

Auteurs

David Haro Alonso (D)

Medical Imaging Research Center, Illinois Institute of Technology, 3440 S. Dearborn St., Suite 100, Chicago, IL, 60616, USA.

Miles N Wernick (MN)

Medical Imaging Research Center, Illinois Institute of Technology, 3440 S. Dearborn St., Suite 100, Chicago, IL, 60616, USA. wernick@iit.edu.

Yongyi Yang (Y)

Medical Imaging Research Center, Illinois Institute of Technology, 3440 S. Dearborn St., Suite 100, Chicago, IL, 60616, USA.

Guido Germano (G)

Departments of Imaging and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA.

Daniel S Berman (DS)

Departments of Imaging and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA.

Piotr Slomka (P)

Departments of Imaging and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA.

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Classifications MeSH