For a sound use of health care data in epidemiology: evaluation of a calibration model for count data with application to prediction of cancer incidence in areas without cancer registry.


Journal

Biostatistics (Oxford, England)
ISSN: 1468-4357
Titre abrégé: Biostatistics
Pays: England
ID NLM: 100897327

Informations de publication

Date de publication:
01 07 2019
Historique:
received: 20 03 2017
accepted: 25 02 2018
pubmed: 5 4 2018
medline: 31 1 2020
entrez: 5 4 2018
Statut: ppublish

Résumé

There is a growing interest in using health care (HC) data to produce epidemiological surveillance indicators such as incidence. Typically, in the field of cancer, incidence is provided by local cancer registries which, in many countries, do not cover the whole territory; using proxy measures from available nationwide HC databases would appear to be a suitable approach to fill this gap. However, in most cases, direct counts from these databases do not provide reliable measures of incidence. To obtain accurate incidence estimations and prediction intervals, these databases need to be calibrated using a registry-based gold standard measure of incidence. This article presents a calibration model for count data developed to predict cancer incidence from HC data in geographical areas without cancer registries. First, the ratio between the proxy measure and incidence is modeled in areas with registries using a Poisson mixed model that allows for heterogeneity between areas (calibration stage). This ratio is then inverted to predict incidence from the proxy measure in areas without registries. Prediction error admits closed-form expression which accounts for heterogeneity in the ratio between areas. A simulation study shows the accuracy of our method in terms of prediction and coverage probability. The method is further applied to predict the incidence of two cancers in France using hospital data as the proxy measure. We hope this approach will encourage sound use of the usually imperfect information extracted from HC data.

Identifiants

pubmed: 29617897
pii: 4956170
doi: 10.1093/biostatistics/kxy012
doi:

Types de publication

Evaluation Study Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

452-467

Informations de copyright

© The Author(s) 2018. Published by Oxford University Press. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Auteurs

Édouard Chatignoux (É)

Santé Publique France, French National Public Health Agency, F-94415 Saint-Maurice, France.

Laurent Remontet (L)

Hospices Civils de Lyon, Service de Biostatistique, F-69495, Pierre-Bénite, France and Laboratoire de Biométrie et Biologie Évolutive, Equipe Biotatistique-Santé, CNRS UMR5558, F-69100, Villeurbanne, France.

Jean Iwaz (J)

Hospices Civils de Lyon, Service de Biostatistique, F-69495, Pierre-Bénite, France and Laboratoire de Biométrie et Biologie Évolutive, Equipe Biotatistique-Santé, CNRS UMR5558, F-69100, Villeurbanne, France.

Marc Colonna (M)

Registre du Cancer de l'Isère, CHU de Grenoble, F-38043, Grenoble, France and FRANCIM : Réseau Français des Registres de Cancer, F-31073 Toulouse, France.

Zoé Uhry (Z)

Santé Publique France, French National Public Health Agency, F-94415, Saint-Maurice, France and Hospices Civils de Lyon, Service de Biostatistique, F-69495, Pierre-Bénite, France.

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Classifications MeSH