An omnibus test for the global null hypothesis.


Journal

Statistical methods in medical research
ISSN: 1477-0334
Titre abrégé: Stat Methods Med Res
Pays: England
ID NLM: 9212457

Informations de publication

Date de publication:
08 2019
Historique:
pubmed: 11 4 2018
medline: 28 10 2020
entrez: 12 4 2018
Statut: ppublish

Résumé

Global hypothesis tests are a useful tool in the context of clinical trials, genetic studies, or meta-analyses, when researchers are not interested in testing individual hypotheses, but in testing whether none of the hypotheses is false. There are several possibilities how to test the global null hypothesis when the individual null hypotheses are independent. If it is assumed that many of the individual null hypotheses are false, combination tests have been recommended to maximize power. If, however, it is assumed that only one or a few null hypotheses are false, global tests based on individual test statistics are more powerful (e.g. Bonferroni or Simes test). However, usually there is no a priori knowledge on the number of false individual null hypotheses. We therefore propose an omnibus test based on cumulative sums of the transformed p-values. We show that this test yields an impressive overall performance. The proposed method is implemented in an R-package called

Identifiants

pubmed: 29635962
doi: 10.1177/0962280218768326
pmc: PMC6676337
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

2292-2304

Subventions

Organisme : Austrian Science Fund FWF
ID : W 1225
Pays : Austria

Références

Bioinformatics. 2004 Jan 1;20(1):93-9
pubmed: 14693814
Bioinformatics. 2008 Oct 1;24(19):2200-8
pubmed: 18635567
Genetics. 2017 Feb;205(2):871-890
pubmed: 28007884
Cancer. 1993 Apr 15;71(8):2585-97
pubmed: 8453582

Auteurs

Andreas Futschik (A)

1 Department of Applied Statistics, Johannes Kepler University, Linz, Austria.
2 Kavli Institute for Theoretical Physics, UC Santa Barbara, Santa Barbara, USA.
3 Vienna Graduate School of Population Genetics, University of Veterinary Medicine, Vienna, Austria.

Thomas Taus (T)

3 Vienna Graduate School of Population Genetics, University of Veterinary Medicine, Vienna, Austria.
4 Institute of Population Genetics, University of Veterinary Medicine, Vienna, Austria.

Sonja Zehetmayer (S)

5 Center for Medical Statistics, Informatics, and Intelligent Systems, Medical University of Vienna, Vienna, Austria.

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Classifications MeSH