Links between environment, diet, and the hunter-gatherer microbiome.


Journal

Gut microbes
ISSN: 1949-0984
Titre abrégé: Gut Microbes
Pays: United States
ID NLM: 101495343

Informations de publication

Date de publication:
2019
Historique:
pubmed: 18 8 2018
medline: 8 8 2019
entrez: 18 8 2018
Statut: ppublish

Résumé

The study of traditional populations provides a view of human-associated microbes unperturbed by industrialization, as well as a window into the microbiota that co-evolved with humans. Here we discuss our recent work characterizing the microbiota from the Hadza hunter-gatherers of Tanzania. We found seasonal shifts in bacterial taxa, diversity, and carbohydrate utilization by the microbiota. When compared to the microbiota composition from other populations around the world, the Hadza microbiota shares bacterial families with other traditional societies that are rare or absent from microbiotas of industrialized nations. We present additional observations from the Hadza microbiota and their lifestyle and environment, including microbes detected on hands, water, and animal sources, how the microbiota varies with sex and age, and the short-term effects of introducing agricultural products into the diet. In the context of our previously published findings and of these additional observations, we discuss a path forward for future work.

Identifiants

pubmed: 30118385
doi: 10.1080/19490976.2018.1494103
pmc: PMC6546328
doi:

Substances chimiques

Dietary Carbohydrates 0

Types de publication

Comparative Study Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Pagination

216-227

Subventions

Organisme : NCCIH NIH HHS
ID : DP1 AT009892
Pays : United States
Organisme : NIDDK NIH HHS
ID : R01 DK085025
Pays : United States
Organisme : NIDDK NIH HHS
ID : R01 DK090989
Pays : United States
Organisme : NIAID NIH HHS
ID : T32 AI007328
Pays : United States

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Auteurs

Gabriela K Fragiadakis (GK)

a Department of Microbiology and Immunology , Stanford University School of Medicine , Stanford , CA , USA.

Samuel A Smits (SA)

a Department of Microbiology and Immunology , Stanford University School of Medicine , Stanford , CA , USA.

Erica D Sonnenburg (ED)

a Department of Microbiology and Immunology , Stanford University School of Medicine , Stanford , CA , USA.

William Van Treuren (W)

a Department of Microbiology and Immunology , Stanford University School of Medicine , Stanford , CA , USA.

Gregor Reid (G)

b Department of Microbiology & Immunology , Department of Surgery, Western University, Lawson Health Research Institute , London , Ontario , Canada.

Rob Knight (R)

c Departments of Pediatrics and Computer Science & Engineering and Center for Microbiome Innovation , University of California , San Diego , CA , USA.

Alphaxard Manjurano (A)

d Parasitic Diseases Programme and Laboratory Sciences Programme, National Institute for Medical Research, Mwanza Centre , Mwanza , Tanzania.

John Changalucha (J)

e Sexual and Reproductive Health Programme and Laboratory Sciences Programme, National Institute for Medical Research, Mwanza Centre , Mwanza , Tanzania.

Maria Gloria Dominguez-Bello (MG)

f Department of Biochemistry and Microbiology, Department of Anthropology Rutgers, The State University of New Jersey, New Brunswick , NJ USA.

Jeff Leach (J)

g Human Food Project , Terlingua , Texas , USA.
h The Department of Twin Research and Genetic Epidemiology King's College London, St Thomas' Hospital , London , UK.

Justin L Sonnenburg (JL)

a Department of Microbiology and Immunology , Stanford University School of Medicine , Stanford , CA , USA.
i Chan Zuckerberg Biohub , San Francisco, CA , USA.

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Classifications MeSH