Formaldehyde interacts with RNA rather than DNA: Accumulation of formaldehyde by the RNA-inorganic hybrid material.

Accumulation Conformational change Formaldehyde Nucleic acid Organic-inorganic hybrid material

Journal

International journal of biological macromolecules
ISSN: 1879-0003
Titre abrégé: Int J Biol Macromol
Pays: Netherlands
ID NLM: 7909578

Informations de publication

Date de publication:
01 Feb 2019
Historique:
received: 29 07 2018
revised: 30 09 2018
accepted: 23 10 2018
pubmed: 6 11 2018
medline: 4 4 2019
entrez: 6 11 2018
Statut: ppublish

Résumé

Formaldehyde (HCHO) has been known to react with a nucleobase which possesses an amino group and denatures the nucleic acid, such as RNA and DNA. Therefore, we demonstrated the accumulation of HCHO from an aqueous solution by the water-insoluble nucleic acid-inorganic hybrid materials which were prepared by mixing the nucleic acid with a silane coupling reagent (SiNSi). As a result, the water-insoluble nucleic acid-SiNSi hybrid materials effectively accumulated the HCHO from an aqueous solution. In particular, at the maximum accumulated amount of HCHO, the molar ratios of RNA (ribonucleotide):HCHO and DNA (deoxyribonucleotide):HCHO were 1:0.055 and 1:0.015, respectively. Additionally, the accumulative mechanism of HCHO was related to the reaction between HCHO and the nucleobase with the amino group. Furthermore, the RNA material showed a conformational change at a low HCHO concentration and these conformational changes of RNA were greater than that of DNA. These results suggested that HCHO molecule interacts with RNA rather than DNA.

Identifiants

pubmed: 30393135
pii: S0141-8130(18)33930-8
doi: 10.1016/j.ijbiomac.2018.10.159
pii:
doi:

Substances chimiques

Water 059QF0KO0R
Formaldehyde 1HG84L3525
RNA 63231-63-0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

168-173

Informations de copyright

Copyright © 2018 Elsevier B.V. All rights reserved.

Auteurs

Masanori Yamada (M)

Department of Chemistry, Faculty of Science, Okayama University of Science, Ridaicho, Kita-ku, Okayama 700-0005, Japan. Electronic address: myamada@chem.ous.ac.jp.

Shoko Funaki (S)

Department of Chemistry, Faculty of Science, Okayama University of Science, Ridaicho, Kita-ku, Okayama 700-0005, Japan.

Saaya Miki (S)

Department of Chemistry, Faculty of Science, Okayama University of Science, Ridaicho, Kita-ku, Okayama 700-0005, Japan.

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Classifications MeSH