Protein-protein interaction network analysis of insecticide resistance molecular mechanism in Drosophila melanogaster.
Drosophila melanogaster
GO enrichment
KEGG pathway
insecticide resistance
protein interaction network
topological property
Journal
Archives of insect biochemistry and physiology
ISSN: 1520-6327
Titre abrégé: Arch Insect Biochem Physiol
Pays: United States
ID NLM: 8501752
Informations de publication
Date de publication:
Jan 2019
Jan 2019
Historique:
received:
16
09
2018
revised:
15
10
2018
accepted:
27
10
2018
pubmed:
28
11
2018
medline:
27
1
2019
entrez:
28
11
2018
Statut:
ppublish
Résumé
The problem of resistance has not been solved fundamentally at present, because the development speed of new insecticides can not keep pace with the development speed of resistance, and the lack of understanding of molecular mechanism of resistance. Here we collected seed genes and their interacting proteins involved in insecticide resistance molecular mechanism in Drosophila melanogaster by literature mining and the String database. We identified a total of 528 proteins and 13514 protein-protein interactions. The protein interaction network was constructed by String and Pajek, and we analyzed the topological properties, such as degree centrality and eigenvector centrality. Proteasome complexes and drug metabolism-cytochrome P450 were an enrichment by Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis. This is the first time to explore the insecticide resistance molecular mechanism of D. melanogaster by the methods and tools of network biology, it can provide the bioinformatic foundation for further understanding the mechanisms of insecticide resistance.
Substances chimiques
Insecticides
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
e21523Subventions
Organisme : National Key Research and Development Program, Ministry of Science and Technology, China
ID : 2017YFD0201204
Informations de copyright
© 2018 Wiley Periodicals, Inc.