Challenges in diffusion MRI tractography - Lessons learned from international benchmark competitions.


Journal

Magnetic resonance imaging
ISSN: 1873-5894
Titre abrégé: Magn Reson Imaging
Pays: Netherlands
ID NLM: 8214883

Informations de publication

Date de publication:
04 2019
Historique:
received: 08 10 2018
accepted: 17 11 2018
pubmed: 7 12 2018
medline: 25 6 2019
entrez: 4 12 2018
Statut: ppublish

Résumé

Diffusion MRI (dMRI) fiber tractography has become a pillar of the neuroimaging community due to its ability to noninvasively map the structural connectivity of the brain. Despite widespread use in clinical and research domains, these methods suffer from several potential drawbacks or limitations. Thus, validating the accuracy and reproducibility of techniques is critical for sound scientific conclusions and effective clinical outcomes. Towards this end, a number of international benchmark competitions, or "challenges", has been organized by the diffusion MRI community in order to investigate the reliability of the tractography process by providing a platform to compare algorithms and results in a fair manner, and evaluate common and emerging algorithms in an effort to advance the state of the field. In this paper, we summarize the lessons from a decade of challenges in tractography, and give perspective on the past, present, and future "challenges" that the field of diffusion tractography faces.

Identifiants

pubmed: 30503948
pii: S0730-725X(18)30516-2
doi: 10.1016/j.mri.2018.11.014
pmc: PMC6331218
mid: NIHMS1516415
pii:
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, U.S. Gov't, Non-P.H.S. Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

194-209

Subventions

Organisme : NIBIB NIH HHS
ID : R01 EB017230
Pays : United States
Organisme : NINDS NIH HHS
ID : R01 NS058639
Pays : United States
Organisme : NIBIB NIH HHS
ID : T32 EB001628
Pays : United States
Organisme : NICHD NIH HHS
ID : U54 HD083211
Pays : United States

Informations de copyright

Copyright © 2018 Elsevier Inc. All rights reserved.

Références

NMR Biomed. 2017 Sep;30(9):
pubmed: 28643354
Proc Natl Acad Sci U S A. 1999 Aug 31;96(18):10422-7
pubmed: 10468624
Magn Reson Med. 2015 Jan;73(1):299-305
pubmed: 24469863
J Neuroimaging. 2015 Nov-Dec;25(6):875-82
pubmed: 26259925
NMR Biomed. 2010 Feb;23(2):152-62
pubmed: 19739233
Neuroimage. 2014 Dec;103:10-19
pubmed: 25225002
Neuroimage. 2018 Nov 15;182:62-79
pubmed: 29920374
Neuroimage. 2004 Nov;23(3):1176-85
pubmed: 15528117
Med Image Anal. 2013 Oct;17(7):844-57
pubmed: 23706753
Magn Reson Med. 2015 Jan;73(1):70-81
pubmed: 24604728
IEEE Trans Med Imaging. 2014 Feb;33(2):384-99
pubmed: 24132007
Neuroimage. 2018 Nov 1;181:645-658
pubmed: 29936310
Med Image Anal. 2015 Feb;20(1):135-51
pubmed: 25487610
Magn Reson Med. 2008 Jun;59(6):1347-54
pubmed: 18506799
Neuroimage. 2018 Dec;183:239-253
pubmed: 30086412
Neuroimage Clin. 2017 Jun 15;15:659-672
pubmed: 28664037
Med Image Anal. 2018 Feb;44:177-195
pubmed: 29268169
Inf Process Med Imaging. 2003 Jul;18:672-83
pubmed: 15344497
Magn Reson Med. 2014 Nov;72(5):1460-70
pubmed: 24323973
Neuroinformatics. 2019 Jan;17(1):131-145
pubmed: 30006920
Clin Neurol Neurosurg. 2014 Sep;124:51-8
pubmed: 25016239
Nat Methods. 2014 Mar;11(3):281-9
pubmed: 24441936
Neuroinformatics. 2017 Oct;15(4):321-331
pubmed: 28748393
Magn Reson Med. 2005 Nov;54(5):1194-206
pubmed: 16161109
Neuroimage. 2017 Sep;158:417-429
pubmed: 28716716
Neural Comput. 2017 Jun;29(6):1441-1467
pubmed: 28333589
Nat Commun. 2017 Nov 7;8(1):1349
pubmed: 29116093
Neurosurgery. 2009 Sep;65(3):463-9; discussion 469-70
pubmed: 19687690
IEEE Trans Med Imaging. 2015 Jan;34(1):246-57
pubmed: 25167548
Proc Natl Acad Sci U S A. 2014 Nov 18;111(46):16574-9
pubmed: 25368179
Magn Reson Med. 1999 Dec;42(6):1123-7
pubmed: 10571934
Med Image Anal. 2013 Aug;17(6):632-48
pubmed: 23708255
J Magn Reson Imaging. 2008 Apr;27(4):685-91
pubmed: 18302232
Hum Brain Mapp. 2017 Nov;38(11):5485-5500
pubmed: 28766853
Neuron. 2015 Jul 15;87(2):252-6
pubmed: 26182412
Magn Reson Med. 2004 Dec;52(6):1358-72
pubmed: 15562495
Neuroimage. 2011 May 1;56(1):220-34
pubmed: 21256221
IEEE Trans Med Imaging. 2016 Nov;35(11):2459-2475
pubmed: 27305669
Phys Med Biol. 2016 Jul 7;61(13):4729-45
pubmed: 27271991
Neuroimage. 2012 Jun;61(2):324-41
pubmed: 22120012
IEEE Trans Med Imaging. 2015 Oct;34(10):1993-2024
pubmed: 25494501
Magn Reson Med. 2002 Jun;47(6):1083-99
pubmed: 12111955
Med Phys. 2017 May;44(5):2020-2036
pubmed: 28273355
Neuroimage. 2013 Feb 15;67:298-312
pubmed: 23238430
Magn Reson Med. 2003 Feb;49(2):206-15
pubmed: 12541239
Neuroimage. 2017 Feb 15;147:703-725
pubmed: 28034765
Med Image Anal. 2015 Dec;26(1):316-31
pubmed: 26606457
NMR Biomed. 2016 Apr;29(4):400-10
pubmed: 27077155
Neuroimage. 2012 Jul 16;61(4):1000-16
pubmed: 22484410
J Magn Reson Imaging. 2020 Jan;51(1):234-249
pubmed: 31179595
Med Image Comput Comput Assist Interv. 2014;17(Pt 3):241-8
pubmed: 25320805
Neuroimage. 2018 Nov 15;182:39-61
pubmed: 29920376
Neuroimage. 2012 Oct 1;62(4):2222-31
pubmed: 22366334
Neuroimage. 2012 Feb 15;59(4):3976-94
pubmed: 22036682
Front Neurosci. 2016 Jun 06;10:247
pubmed: 27375412
J Gerontol A Biol Sci Med Sci. 2008 Dec;63(12):1416-9
pubmed: 19126858
Med Image Anal. 2010 Dec;14(6):707-22
pubmed: 20573538
Neural Comput. 2016 Sep;28(9):1769-811
pubmed: 27391678
Neuroimage. 2010 Jan 15;49(2):1446-58
pubmed: 19781650
Neuroimage. 2008 Aug 15;42(2):617-25
pubmed: 18583153
NMR Biomed. 2011 Dec;24(10):1422-32
pubmed: 21755551
J Chem Phys. 2008 Apr 21;128(15):154511
pubmed: 18433239
Neuroimage. 2016 Jul 15;135:345-62
pubmed: 26923372
Neuroinformatics. 2011 Sep;9(2-3):143-57
pubmed: 21249531
Hum Brain Mapp. 2017 Jan;38(1):509-527
pubmed: 27647682
Neuroimage. 2014 Dec;103:411-426
pubmed: 25109526
Neuroimage. 2019 Jan 15;185:1-11
pubmed: 30317017
Neuroimage. 2019 Mar;188:391-402
pubmed: 30553045
Neuroimage. 2018 Nov 15;182:469-478
pubmed: 29337276
Neuroimage. 2011 Jan 15;54(2):1091-101
pubmed: 20832489
IEEE Trans Med Imaging. 2018 Nov;37(11):2514-2525
pubmed: 29994302
Magn Reson Med. 2019 Mar;81(3):2011-2024
pubmed: 30277272
PLoS One. 2016 Oct 13;11(10):e0163143
pubmed: 27736872
Front Neuroanat. 2015 Nov 05;9:142
pubmed: 26594156
Magn Reson Med. 2008 Dec;60(6):1276-83
pubmed: 19030160
Magn Reson Imaging. 2019 Jan;55:7-25
pubmed: 30213755
Magn Reson Med. 2007 Sep;58(3):497-510
pubmed: 17763358
Neuroimage. 2012 Apr 2;60(2):1412-25
pubmed: 22270351
J Magn Reson. 2017 Feb;275:98-113
pubmed: 28040623

Auteurs

Kurt G Schilling (KG)

Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, TN, United States of America. Electronic address: kurt.g.schilling.1@vumc.org.

Alessandro Daducci (A)

Computer Science Department, University of Verona, Verona, Italy.

Klaus Maier-Hein (K)

Division of Medical Image Computing, German Cancer Research Center (DKFZ), Heidelberg 69120, Germany.

Cyril Poupon (C)

Neurospin, Frédéric Joliot Life Sciences Institute, CEA, Gif-sur-Yvette, France.

Jean-Christophe Houde (JC)

Sherbrooke Connectivity Imaging Lab (SCIL), Computer Science Department, Université de Sherbrooke, Québec, Canada.

Vishwesh Nath (V)

Electrical Engineering & Computer Science, Vanderbilt University, Nashville, TN, United States of America.

Adam W Anderson (AW)

Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, TN, United States of America; Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, United States of America.

Bennett A Landman (BA)

Vanderbilt University Institute of Imaging Science, Vanderbilt University, Nashville, TN, United States of America; Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, United States of America; Department of Electrical Engineering, Vanderbilt University, Nashville, TN, United States of America.

Maxime Descoteaux (M)

Sherbrooke Connectivity Imaging Lab (SCIL), Computer Science Department, Université de Sherbrooke, Québec, Canada.

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