Comprehensive Transcriptional Profiling of the Gastrointestinal Tract of Ruminants from Birth to Adulthood Reveals Strong Developmental Stage Specific Gene Expression.
RNA-Seq
development
gastrointestinal tract
gene expression
goat
immunity
macrophage
ruminant
sheep
transcription
Journal
G3 (Bethesda, Md.)
ISSN: 2160-1836
Titre abrégé: G3 (Bethesda)
Pays: England
ID NLM: 101566598
Informations de publication
Date de publication:
07 02 2019
07 02 2019
Historique:
pubmed:
12
12
2018
medline:
5
6
2019
entrez:
12
12
2018
Statut:
epublish
Résumé
One of the most significant physiological challenges to neonatal and juvenile ruminants is the development and establishment of the rumen. Using a subset of RNA-Seq data from our high-resolution atlas of gene expression in sheep (
Identifiants
pubmed: 30530642
pii: g3.118.200810
doi: 10.1534/g3.118.200810
pmc: PMC6385975
doi:
Banques de données
figshare
['10.25387/g3.6741575']
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
359-373Subventions
Organisme : Biotechnology and Biological Sciences Research Council
ID : BB/L001209/1
Pays : United Kingdom
Informations de copyright
Copyright © 2019 Bush et al.
Références
Nat Protoc. 2009;4(10):1535-50
pubmed: 19798086
Nat Biotechnol. 2016 May;34(5):525-7
pubmed: 27043002
PLoS Genet. 2017 Sep 15;13(9):e1006997
pubmed: 28915238
J Biol Chem. 2010 Jan 1;285(1):71-9
pubmed: 19889635
Int Immunol. 2011 Aug;23(8):467-72
pubmed: 21677049
Genet Sel Evol. 2018 Apr 24;50(1):20
pubmed: 29690875
Sci Rep. 2018 Jan 26;8(1):1693
pubmed: 29374218
Nat Rev Mol Cell Biol. 2007 Jan;8(1):49-62
pubmed: 17183360
Sci Rep. 2017 Jul 13;7(1):5345
pubmed: 28706214
Cell Mol Life Sci. 2009 Feb;66(3):447-59
pubmed: 18854942
Infect Immun. 2011 Sep;79(9):3821-32
pubmed: 21730087
J Dairy Sci. 2017 Jul;100(7):5984-5995
pubmed: 28527800
Biochem Biophys Res Commun. 2000 Aug 11;274(3):689-96
pubmed: 10924337
Eur J Immunol. 2011 Sep;41(9):2494-8
pubmed: 21952804
PLoS One. 2015 Jun 19;10(6):e0116437
pubmed: 26090810
Immunity. 2014 May 15;40(5):637-9
pubmed: 24837099
Methods Mol Biol. 2012;804:281-95
pubmed: 22144159
J Innate Immun. 2011;3(6):550-64
pubmed: 22025201
Nature. 2015 Sep 10;525(7568):251-5
pubmed: 26287467
J Dairy Sci. 2003 Oct;86(10):3321-9
pubmed: 14594251
Genome Biol. 2015 Mar 25;16:57
pubmed: 25854118
Nat Protoc. 2018 Apr;13(4):705-722
pubmed: 29543794
Vet Res. 2015 Jun 19;46:61
pubmed: 26092382
Pediatr Res. 2003 Jul;54(1):52-7
pubmed: 12646715
Nat Med. 2017 Nov 07;23(11):1258-1270
pubmed: 29117177
Immunity. 2014 May 15;40(5):720-33
pubmed: 24792913
Vet Res. 2018 Jul 3;49(1):54
pubmed: 29970174
BMC Bioinformatics. 2017 Jun 13;18(1):301
pubmed: 28610557
J Exp Med. 2018 Jun 4;215(6):1507-1518
pubmed: 29789388
Microbiologyopen. 2017 Oct;6(5):
pubmed: 28834331
Trends Immunol. 2013 Mar;34(3):137-43
pubmed: 23103127
Science. 2014 Jun 6;344(6188):1168-1173
pubmed: 24904168
PLoS Pathog. 2016 Dec 6;12(12):e1006038
pubmed: 27923071
RNA. 2016 Jun;22(6):839-51
pubmed: 27022035
BMC Biol. 2012 Nov 15;10:90
pubmed: 23153189
Trends Immunol. 2010 Jul;31(7):278-87
pubmed: 20579935
J Anim Sci. 2002 Jun;80(6):1538-44
pubmed: 12078735
PLoS Biol. 2017 Dec 18;15(12):e2004086
pubmed: 29253856
Nat Genet. 2000 May;25(1):25-9
pubmed: 10802651
J Dairy Sci. 2016 Jun;99(6):4955-4966
pubmed: 26971143
Nat Methods. 2010 Dec;7(12):1009-15
pubmed: 21057496
Funct Integr Genomics. 2013 Mar;13(1):133-42
pubmed: 23314861
J Anim Sci. 2009 Apr;87(13 Suppl):3-9
pubmed: 18952725
Adv Immunol. 2014;122:177-210
pubmed: 24507158
BMC Genomics. 2015 Oct 23;16:839
pubmed: 26494241
Am J Physiol Gastrointest Liver Physiol. 2010 Feb;298(2):G190-202
pubmed: 19926818
J Immunol. 2014 Jun 15;192(12):6053-61
pubmed: 24829417
F1000Res. 2015 Dec 30;4:1521
pubmed: 26925227
Int J Inflam. 2010 Sep 19;2010:823710
pubmed: 21188221
Anim Sci J. 2016 Apr;87(4):584-90
pubmed: 26388291
Bioinformatics. 2010 Jan 1;26(1):139-40
pubmed: 19910308
Nat Commun. 2016 Jun 13;7:ncomms11852
pubmed: 27292029
Sci Rep. 2016 Aug 31;6:32479
pubmed: 27576848
Cell. 1993 Oct 22;75(2):263-74
pubmed: 8402911
Ann Neurol. 2007 Jun;61(6):552-61
pubmed: 17387733
Nucleic Acids Res. 2018 Jan 4;46(D1):D754-D761
pubmed: 29155950
Sci Rep. 2016 Dec 14;6:39022
pubmed: 27966600
J Mol Biol. 2001 Nov 2;313(4):903-19
pubmed: 11697912
Trends Immunol. 2003 May;24(5):242-8
pubmed: 12738417
Cell Tissue Res. 1985;242(1):57-66
pubmed: 4042140
Immunology. 2012 May;136(1):21-7
pubmed: 22269039
Nat Genet. 2017 Mar 30;49(4):485-486
pubmed: 28358125
J Exp Med. 2013 Sep 23;210(10):1977-92
pubmed: 24043763
Nature. 2000 Feb 10;403(6770):601-3
pubmed: 10688178
Nat Rev Immunol. 2004 Jul;4(7):499-511
pubmed: 15229469
PeerJ. 2016 Mar 08;4:e1762
pubmed: 26989612
Animal. 2010 Jul;4(7):993-1007
pubmed: 22444605
Nat Genet. 2017 Apr;49(4):643-650
pubmed: 28263316
Anim Genet. 2018 Dec;49(6):520-526
pubmed: 30311252