RegularizedSCA: Regularized simultaneous component analysis of multiblock data in R.

Common/distinctive components Group Lasso Lasso Linked data analysis Multiblock analysis Simultaneous component analysis

Journal

Behavior research methods
ISSN: 1554-3528
Titre abrégé: Behav Res Methods
Pays: United States
ID NLM: 101244316

Informations de publication

Date de publication:
10 2019
Historique:
pubmed: 14 12 2018
medline: 28 1 2020
entrez: 14 12 2018
Statut: ppublish

Résumé

This article introduces a package developed for R (R Core Team, 2017) for performing an integrated analysis of multiple data blocks (i.e., linked data) coming from different sources. The methods in this package combine simultaneous component analysis (SCA) with structured selection of variables. The key feature of this package is that it allows to (1) identify joint variation that is shared across all the data sources and specific variation that is associated with one or a few of the data sources and (2) flexibly estimate component matrices with predefined structures. Linked data occur in many disciplines (e.g., biomedical research, bioinformatics, chemometrics, finance, genomics, psychology, and sociology) and especially in multidisciplinary research. Hence, we expect our package to be useful in various fields.

Identifiants

pubmed: 30542912
doi: 10.3758/s13428-018-1163-z
pii: 10.3758/s13428-018-1163-z
pmc: PMC6797642
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

2268-2289

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Auteurs

Zhengguo Gu (Z)

Department of Methodology and Statistics, TSB, Tilburg University, PO Box 90153, 5000LE, Tilburg, The Netherlands. z.gu@tilburguniversity.edu.

Katrijn Van Deun (K)

Department of Methodology and Statistics, TSB, Tilburg University, PO Box 90153, 5000LE, Tilburg, The Netherlands.

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Classifications MeSH