From days to hours: Can MALDI-TOF MS system replace both conventional and molecular typing methods with new cut off level for Vancomycin Resistant Enterococcus faecium.


Journal

Journal of microbiological methods
ISSN: 1872-8359
Titre abrégé: J Microbiol Methods
Pays: Netherlands
ID NLM: 8306883

Informations de publication

Date de publication:
07 2019
Historique:
received: 09 05 2018
revised: 11 12 2018
accepted: 17 12 2018
pubmed: 4 1 2019
medline: 18 7 2020
entrez: 4 1 2019
Statut: ppublish

Résumé

Vancomycin-Resistant E. faecium (VRE) strains from clinical specimens were identified by conventional methods before. Following the phenotype-based identification, all strains were also identified using both BD Phoenix and VITEK MS bioMérieux System. Strains were typed with the Bruker MALDI-TOF MS system, pulsed field gel electrophoresis (PFGE) and 16S rRNA gene sequencing analysis and then the sensitivity compared for each. A cut off value of 850 assigned with Bruker MALDI-TOF MS system was found to give equal sensitivity to that of PFGE. Results obtained were compared with those of molecular typing. The main advantage of MALDI-TOF MS technology over the others was the much shorter analysis time which lasted only a few hours rather than days or a whole week. Also, the Bruker MALDI-TOF MS system was used for typing and compared with the gold standard method and this study is first to report the determined cut off level for typing of VRE strains.

Identifiants

pubmed: 30605699
pii: S0167-7012(18)30381-6
doi: 10.1016/j.mimet.2018.12.015
pii:
doi:

Substances chimiques

RNA, Ribosomal, 16S 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

62-68

Informations de copyright

Copyright © 2019 Elsevier B.V. All rights reserved.

Auteurs

Sumeyra Savas (S)

The Scientific and Technological Research Council of Turkey, Kocaeli, Turkey. Electronic address: Sumeyra.savas@tubitak.gov.tr.

Gulsen Hazirolan (G)

Department of Medical Microbiology, Hacettepe University School of Medicine, Ankara, Turkey.

Alper Karagoz (A)

Turkey Public Health Agency, Ankara, Turkey.

Mehmet Parlak (M)

Department of Medical Microbiology, Yuzuncu Yil University School of Medicine, Ankara, Turkey.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH