Colloid osmotic parameterization and measurement of subcellular crowding.


Journal

Molecular biology of the cell
ISSN: 1939-4586
Titre abrégé: Mol Biol Cell
Pays: United States
ID NLM: 9201390

Informations de publication

Date de publication:
15 01 2019
Historique:
entrez: 15 1 2019
pubmed: 15 1 2019
medline: 27 6 2019
Statut: ppublish

Résumé

Crowding of the subcellular environment by macromolecules is thought to promote protein aggregation and phase separation. A challenge is how to parameterize the degree of crowding of the cell interior or artificial solutions that is relevant to these reactions. Here I review colloid osmotic pressure as a crowding metric. This pressure is generated by solutions of macromolecules in contact with pores that are permeable to water and ions but not macromolecules. It generates depletion forces that push macromolecules together in crowded solutions and thus promotes aggregation and phase separation. I discuss measurements of colloid osmotic pressure inside cells using the nucleus, the cytoplasmic gel, and fluorescence resonant energy transfer (FRET) biosensors as osmometers, which return a range of values from 1 to 20 kPa. I argue for a low value, 1-2 kPa, in frog eggs and perhaps more generally. This value is close to the linear range on concentration-pressure curves and is thus not crowded from an osmotic perspective. I discuss the implications of a low crowding pressure inside cells for phase separation biology, buffer design, and proteome evolution. I also discuss a pressure-tension model for nuclear shape, where colloid osmotic pressure generated by nuclear protein import inflates the nucleus.

Identifiants

pubmed: 30640588
doi: 10.1091/mbc.E18-09-0549
pmc: PMC6589563
doi:

Substances chimiques

Colloids 0
Macromolecular Substances 0

Types de publication

Journal Article Research Support, N.I.H., Extramural Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

173-180

Subventions

Organisme : NIGMS NIH HHS
ID : R35 GM131753
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM039565
Pays : United States

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Auteurs

T J Mitchison (TJ)

Marine Biological Laboratory, Woods Hole, MA 02543.
Department of Systems Biology, Harvard Medical School, Boston, MA 02115.

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Classifications MeSH