Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways.
DNA breaks
DNA repair centers
DNA resection
DSBs
Holliday junctions
R-loops
chromatin dynamics
chromosome rearrangements
crossovers
fluorescent proteins
gene amplification
gene conversion
genome instability
gross chromosome rearrangements
homologous recombination
mitotic recombination
mutagenesis
pulsed field gel electrophoresis
replication fork stalling
single-particle tracking
sister chromatid recombination
sister repetitive sequences
site-specific chromosome breaks
toxic recombination intermediates
yeast artificial chromosome
Journal
Microbial cell (Graz, Austria)
ISSN: 2311-2638
Titre abrégé: Microb Cell
Pays: Austria
ID NLM: 101632887
Informations de publication
Date de publication:
07 Jan 2019
07 Jan 2019
Historique:
entrez:
18
1
2019
pubmed:
18
1
2019
medline:
18
1
2019
Statut:
epublish
Résumé
Understanding the plasticity of genomes has been greatly aided by assays for recombination, repair and mutagenesis. These assays have been developed in microbial systems that provide the advantages of genetic and molecular reporters that can readily be manipulated. Cellular assays comprise genetic, molecular, and cytological reporters. The assays are powerful tools but each comes with its particular advantages and limitations. Here the most commonly used assays are reviewed, discussed, and presented as the guidelines for future studies.
Identifiants
pubmed: 30652105
doi: 10.15698/mic2019.01.664
pii: MIC0178E138
pmc: PMC6334234
doi:
Types de publication
Journal Article
Review
Langues
eng
Pagination
1-64Subventions
Organisme : NIGMS NIH HHS
ID : R35 GM118180
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM060987
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM127006
Pays : United States
Organisme : Wellcome Trust
ID : 204684/Z/16/Z
Pays : United Kingdom
Organisme : NIGMS NIH HHS
ID : R35 GM119788
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM026017
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM122880
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM122598
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM126997
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA146940
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM118077
Pays : United States
Organisme : NIGMS NIH HHS
ID : P01 GM105473
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM116007
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM080600
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM118020
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM130322
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM125650
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM071011
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM050006
Pays : United States
Déclaration de conflit d'intérêts
Conflict of interest: The authors declare no conflict of interest.
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