GHSR DNA hypermethylation is a new epigenetic biomarker for gastric adenocarcinoma and beyond.

DNA methylation GHSR biomarker gastric cancer

Journal

Journal of cellular physiology
ISSN: 1097-4652
Titre abrégé: J Cell Physiol
Pays: United States
ID NLM: 0050222

Informations de publication

Date de publication:
Sep 2019
Historique:
received: 18 09 2018
accepted: 10 01 2019
pubmed: 25 1 2019
medline: 25 1 2019
entrez: 25 1 2019
Statut: ppublish

Résumé

Aberrations of DNA methylation are early events in the development of tumors. In this study, we investigated the DNA methylation status of growth hormone secretagogue receptor (GHSR), a promising pan-cancer biomarker, in gastric cancer (GC). Initially, data sets from DNA methylation and gene expression studies available at Gene Expression Omnibus (GEO) were analyzed. Confirmation was done on primary tumor specimens and adjacent normal stomach tissue samples. Both analyses showed significant hypermethylation of GHSR. For further validation, The Cancer Genome Atlas data on stomach cancer was used. A receiver operating characteristic curve analysis yielded an area under the curve value of 0.85, corroborating its usefulness as a diagnostic marker. A genome-wide comethylation analysis revealed several correlated genes. CREB1 was found to act as an upstream regulator of this gene network. Furthermore, GHSR methylation was found to be a biomarker in several other tumor entities, namely cancers of the bladder, endometrium, esophagus, head and neck, liver, thyroid, kidney, and ovary. Our findings along with previous reports on other types of cancer suggest a high potential of GHSR gene methylation as a pan-cancer biomarker, which could be considered for liquid biopsy applications.

Identifiants

pubmed: 30677130
doi: 10.1002/jcp.28179
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

15320-15329

Subventions

Organisme : Shahroud University of Medical Sciences
ID : 9439

Informations de copyright

© 2019 Wiley Periodicals, Inc.

Auteurs

Mohammad Amini (M)

School of Medicine, Shahroud University of Medical Sciences, Shahroud, Iran.

Kobra Foroughi (K)

School of Medicine, Shahroud University of Medical Sciences, Shahroud, Iran.

Fatemeh Talebi (F)

School of Medicine, Shahroud University of Medical Sciences, Shahroud, Iran.

Hemat Aghagolzade Haji (H)

Department of Biochemistry, Faculty of Medicine, Babol University of Medical Sciences, Babol, Iran.

Fatemeh Kamali (F)

Iran National Tumor Bank, Cancer Institute of Iran, Tehran, Iran.

Pouria Jandaghi (P)

Department of Human Genetics, McGill University, Montreal, Quebec, Canada.
McGill University and Genome Quebec Innovation Centre, Montreal, Quebec, Canada.

Jörg D Hoheisel (JD)

Division of Functional Genome Analysis (B070), German Cancer Research Center (DKFZ), Heidelberg, Germany.

Mehdi Manoochehri (M)

School of Medicine, Shahroud University of Medical Sciences, Shahroud, Iran.
Molecular Genetics of Breast Cancer (B072), German Cancer Research Center (DKFZ), Heidelberg, Germany.

Classifications MeSH