A Simplified Genomic Profiling Approach Predicts Outcome in Metastatic Colorectal Cancer.
NGS
chemotherapy
genomic profiling
precision medicine
predictive
Journal
Cancers
ISSN: 2072-6694
Titre abrégé: Cancers (Basel)
Pays: Switzerland
ID NLM: 101526829
Informations de publication
Date de publication:
27 01 2019
27 01 2019
Historique:
received:
24
12
2018
revised:
19
01
2019
accepted:
22
01
2019
entrez:
30
1
2019
pubmed:
30
1
2019
medline:
30
1
2019
Statut:
epublish
Résumé
The response of metastatic colorectal cancer (mCRC) to the first-line conventional combination therapy is highly variable, reflecting the elevated heterogeneity of the disease. The genetic alterations underlying this heterogeneity have been thoroughly characterized through omic approaches requiring elevated efforts and costs. In order to translate the knowledge of CRC molecular heterogeneity into a practical clinical approach, we utilized a simplified Next Generation Sequencing (NGS) based platform to screen a cohort of 77 patients treated with first-line conventional therapy. Samples were sequenced using a panel of hotspots and targeted regions of 22 genes commonly involved in CRC. This revealed 51 patients carrying actionable gene mutations, 22 of which carried druggable alterations. These mutations were frequently associated with additional genetic alterations. To take into account this molecular complexity and assisted by an unbiased bioinformatic analysis, we defined three subgroups of patients carrying distinct molecular patterns. We demonstrated these three molecular subgroups are associated with a different response to first-line conventional combination therapies. The best outcome was achieved in patients exclusively carrying mutations on
Identifiants
pubmed: 30691222
pii: cancers11020147
doi: 10.3390/cancers11020147
pmc: PMC6406354
pii:
doi:
Types de publication
Journal Article
Langues
eng
Références
J Clin Oncol. 2004 Jan 15;22(2):229-37
pubmed: 14657227
N Engl J Med. 2004 Jun 3;350(23):2335-42
pubmed: 15175435
J Clin Oncol. 2005 Aug 1;23(22):4866-75
pubmed: 15939922
Lancet Oncol. 2007 Oct;8(10):898-911
pubmed: 17888735
J Clin Oncol. 2008 Apr 20;26(12):2013-9
pubmed: 18421054
Adv Med Sci. 2008;53(1):59-63
pubmed: 18650148
J Clin Oncol. 2009 Feb 10;27(5):663-71
pubmed: 19114683
N Engl J Med. 2009 Apr 2;360(14):1408-17
pubmed: 19339720
J Clin Oncol. 2009 Dec 10;27(35):5931-7
pubmed: 19884549
J Clin Oncol. 2010 Mar 1;28(7):1254-61
pubmed: 20100961
Nature. 2012 Jul 18;487(7407):330-7
pubmed: 22810696
N Engl J Med. 2013 Sep 12;369(11):1023-34
pubmed: 24024839
Cancer Biol Ther. 2014 May;15(5):496-503
pubmed: 24521660
Cancer Biol Ther. 2014 Jul;15(7):826-31
pubmed: 24755613
Lancet Oncol. 2014 Sep;15(10):1065-75
pubmed: 25088940
J Clin Pathol. 2015 Jan;68(1):64-8
pubmed: 25378536
J Clin Oncol. 2015 Mar 1;33(7):692-700
pubmed: 25605843
Clin Biochem. 2015 Sep;48(13-14):908-10
pubmed: 25872148
Nat Rev Clin Oncol. 2015 Oct;12(10):607-19
pubmed: 26215044
Nat Med. 2015 Nov;21(11):1350-6
pubmed: 26457759
J Transl Med. 2016 May 04;14(1):118
pubmed: 27146902
Nat Commun. 2016 Jun 15;7:11743
pubmed: 27302369
JAMA Oncol. 2016 Oct 10;:null
pubmed: 27722750
Nat Rev Clin Oncol. 2017 Apr;14(4):235-246
pubmed: 27922044
CA Cancer J Clin. 2017 May 6;67(3):177-193
pubmed: 28248415
Int J Colorectal Dis. 2017 Aug;32(8):1179-1190
pubmed: 28424871
Science. 2017 Jul 28;357(6349):409-413
pubmed: 28596308
Cancer Treat Rev. 2017 Sep;59:93-101
pubmed: 28779636
Semin Cell Dev Biol. 2018 Jun;78:51-61
pubmed: 28779979
JCO Precis Oncol. 2017 Jul;2017:
pubmed: 28890946
Ann Gastroenterol. 2017;30(6):613-621
pubmed: 29118555
Oncotarget. 2017 Aug 24;8(55):93567-93579
pubmed: 29212173
J Transl Med. 2017 Dec 08;15(1):246
pubmed: 29221448
Cancer Cell. 2018 Jan 8;33(1):125-136.e3
pubmed: 29316426
Cancer Discov. 2018 Apr;8(4):428-443
pubmed: 29431699
Oncotarget. 2018 Apr 17;9(29):20761-20768
pubmed: 29755687
Oncogenesis. 2018 Jul 22;7(7):55
pubmed: 30032163
Int J Clin Oncol. 2019 Feb;24(2):141-152
pubmed: 30612269
CA Cancer J Clin. 2019 Jan;69(1):7-34
pubmed: 30620402