Proteinaceous Nano container Encapsulate Polycyclic Aromatic Hydrocarbons.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
31 01 2019
Historique:
received: 04 07 2018
accepted: 25 11 2018
entrez: 2 2 2019
pubmed: 2 2 2019
medline: 2 2 2019
Statut: epublish

Résumé

Polycyclic aromatic hydrocarbons (PAHs) are toxic, mutagenic and among the most damaging chemical compounds with regard to living organisms. Because of their persistence and wide distribution removal from the environment is an important challenge. Here we report a new Nano container matrix based on the deep sea archaea-derived RHCC-Nanotube (RHCC-NT), which rapidly and preferentially binds low molecular weight PAHs. Under controlled-laboratory conditions and using fluorescence spectroscopy in combination with X-ray crystallography and MD simulations, we quantified the real-time binding of low molecular weight PAHs (2-4 rings) to our substrate. Binding coefficients ranged from 5.4 ± 1.6 (fluorene) to 32 ± 7.0 μM (acenaphthylene) and a binding capacity of 85 pmoles PAH per mg RHCC-NT, or 2.12 μmoles in a standard 25 mg sampler. The uptake rate of pyrene was calculated to be 1.59 nmol/hr∙mol RHCC-NT (at 10  C). Our results clearly show that RHCC-NT is uniquely suited as a monitoring matrix for low molecular weight PAHs.

Identifiants

pubmed: 30705306
doi: 10.1038/s41598-018-37323-x
pii: 10.1038/s41598-018-37323-x
pmc: PMC6355809
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

1058

Références

Nat Struct Biol. 2000 Sep;7(9):772-6
pubmed: 10966648
Trends Cell Biol. 2001 Feb;11(2):82-8
pubmed: 11166216
EMBO J. 2002 Nov 15;21(22):5960-8
pubmed: 12426368
J Am Chem Soc. 2004 Jun 23;126(24):7683-9
pubmed: 15198616
Acta Crystallogr D Biol Crystallogr. 2004 Aug;60(Pt 8):1355-63
pubmed: 15272157
J Chem Phys. 2005 Aug 22;123(8):084108
pubmed: 16164283
J Comput Chem. 2005 Dec;26(16):1701-18
pubmed: 16211538
J Biol Chem. 2007 May 11;282(19):14348-55
pubmed: 17311915
Methods Enzymol. 1991;202:497-511
pubmed: 1784186
Phys Chem Chem Phys. 2007 Nov 21;9(43):5761-71
pubmed: 19462571
Eur J Pharmacol. 2009 Dec 25;625(1-3):101-7
pubmed: 19835864
Nat Protoc. 2011 Mar;6(3):365-87
pubmed: 21372817
PLoS One. 2012;7(11):e48130
pubmed: 23133613
Ecotoxicol Environ Saf. 2013 Jun;92:18-26
pubmed: 23490194
Sci Total Environ. 2013 Jun 1;454-455:328-36
pubmed: 23562685
Aquat Toxicol. 2015 Aug;165:222-30
pubmed: 26118968
J Chem Theory Comput. 2006 Jan;2(1):128-39
pubmed: 26626387
J Chem Theory Comput. 2006 Sep;2(5):1255-73
pubmed: 26626834
J Hazard Mater. 2016 Jul 15;312:200-207
pubmed: 27037474
Proteins. 2017 Dec;85(12):2209-2216
pubmed: 28905430
J Struct Biol. 2018 Sep;203(3):281-287
pubmed: 29879486
J Mol Biol. 1995 Dec 15;254(5):801-7
pubmed: 7500351
Biochemistry. 1996 May 21;35(20):6212-24
pubmed: 8639561
Biophys J. 1997 Mar;72(3):1047-69
pubmed: 9138555
Proteins. 1998 Aug 15;32(3):381-96
pubmed: 9715913

Auteurs

Matthew McDougall (M)

Department of Chemistry, University of Manitoba, 144 Dysart Road, Winnipeg, Manitoba, R3T 2N2, Canada.
Centre for Oil and Gas Research and Development (COGRAD), 144 Dysart Road, Winnipeg, MB, R3T 2N2, Canada.

Olga Francisco (O)

Department of Chemistry, University of Manitoba, 144 Dysart Road, Winnipeg, Manitoba, R3T 2N2, Canada.
Centre for Oil and Gas Research and Development (COGRAD), 144 Dysart Road, Winnipeg, MB, R3T 2N2, Canada.

Candice Harder-Viddal (C)

Department of Chemistry and Physics, Canadian Mennonite University, 500 Shaftesbury Blvd, Winnipeg, MB, R3T 2N2, Canada.

Roy Roshko (R)

Department of Physics and Astronomy, University of Manitoba, 30A Sifton Rd, Winnipeg, MB, R3T 2N2, Canada.

Fabian Heide (F)

Department of Chemistry, University of Manitoba, 144 Dysart Road, Winnipeg, Manitoba, R3T 2N2, Canada.

Shubleen Sidhu (S)

Department of Chemistry, University of Manitoba, 144 Dysart Road, Winnipeg, Manitoba, R3T 2N2, Canada.

Mazdak Khajehpour (M)

Department of Chemistry, University of Manitoba, 144 Dysart Road, Winnipeg, Manitoba, R3T 2N2, Canada.

Jennifer Leslie (J)

Stantec Consulting Inc., 500-311 Portage Ave., Winnipeg, MB, R3B 2B9, Canada.

Vince Palace (V)

IISD-Experimental Lakes Area, 111 Lombard Ave, Winnipeg, MB, R3B 0T4, Canada.

Gregg T Tomy (GT)

Department of Chemistry, University of Manitoba, 144 Dysart Road, Winnipeg, Manitoba, R3T 2N2, Canada.
Centre for Oil and Gas Research and Development (COGRAD), 144 Dysart Road, Winnipeg, MB, R3T 2N2, Canada.

Jörg Stetefeld (J)

Department of Chemistry, University of Manitoba, 144 Dysart Road, Winnipeg, Manitoba, R3T 2N2, Canada. jorg.stetefeld@umanitoba.ca.
Centre for Oil and Gas Research and Development (COGRAD), 144 Dysart Road, Winnipeg, MB, R3T 2N2, Canada. jorg.stetefeld@umanitoba.ca.

Classifications MeSH