The overexpression of GRASP might inhibit cell proliferation and invasion in hepatocellular carcinoma.

GRASP overexpression methylation subtypes prognosis survival related model proliferation risk score

Journal

Journal of cellular physiology
ISSN: 1097-4652
Titre abrégé: J Cell Physiol
Pays: United States
ID NLM: 0050222

Informations de publication

Date de publication:
Sep 2019
Historique:
revised: 24 11 2018
received: 27 09 2018
accepted: 30 11 2018
pubmed: 20 2 2019
medline: 20 2 2019
entrez: 20 2 2019
Statut: ppublish

Résumé

This study aimed to validate the methylation of key genes in hepatocellular carcinoma (HCC) screened by bioinformatics analysis and explore whether they affected HCC cell proliferation, migration, and invasion. Using The Cancer Genome Atlas (TCGA) database, HCC-related differentially methylated positions (DMPs) were screened, genes corresponding to DMPs were selected, and prognosis-related genes were identified. A representative DMP was used to divide the DMPs into hyper- and hypomethylated groups. Expression of key genes in cell lines was detected using quantitative real-time polymerase chain reaction and western blot analysis. After treatment of HepG2 cells with 5-Aza-2'-deoxycytidine (5-Aza-DC), gene expression was observed. Bisulfite sequencing PCR assay was used to detect methylation frequency. Overexpressed GRASP lentiviral vectors were constructed to analyze their influence on cell proliferation, migration, and invasion using cell counting kit-8 and transwell assays. Forty-three HCC prognosis-related genes were screened using the TCGA database. cg00249511 (SCT) was used to divide the DMPs into hyper- and hypomethylated groups, distinguishing between high- and low-risk samples. The prognosis survival model constructed using 12 genes revealed the prognosis type. GRASP messenger RNA was downregulated in HepG2 and upregulated after 5-Aza-DC treatment. In HCC tissues, methylation frequency of GRASP was upregulated. GRASP overexpression inhibited HepG2 cell proliferation, invasion, and G-CSFR expression. Thus, GRASP might be a prognosis-related gene controlled by methylation.

Identifiants

pubmed: 30779348
doi: 10.1002/jcp.28285
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

16215-16225

Subventions

Organisme : Shanghai Municipal Science and Technology Commission Foundation
ID : 17401935000

Informations de copyright

© 2019 Wiley Periodicals, Inc.

Auteurs

Yang Cheng (Y)

Institute of Liver Disease, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China.

Baobing Yin (B)

Department of General Surgery, Huashan Hospital Affiliated to Fudan University, Shanghai, China.

Tianlu Hou (T)

Institute of Liver Disease, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China.

Tianyang Chen (T)

Department of General Surgery, Huashan Hospital Affiliated to Fudan University, Shanghai, China.

Jian Ping (J)

Institute of Liver Disease, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai, China.

Classifications MeSH