The overexpression of GRASP might inhibit cell proliferation and invasion in hepatocellular carcinoma.
GRASP overexpression
methylation subtypes
prognosis survival related model
proliferation
risk score
Journal
Journal of cellular physiology
ISSN: 1097-4652
Titre abrégé: J Cell Physiol
Pays: United States
ID NLM: 0050222
Informations de publication
Date de publication:
Sep 2019
Sep 2019
Historique:
revised:
24
11
2018
received:
27
09
2018
accepted:
30
11
2018
pubmed:
20
2
2019
medline:
20
2
2019
entrez:
20
2
2019
Statut:
ppublish
Résumé
This study aimed to validate the methylation of key genes in hepatocellular carcinoma (HCC) screened by bioinformatics analysis and explore whether they affected HCC cell proliferation, migration, and invasion. Using The Cancer Genome Atlas (TCGA) database, HCC-related differentially methylated positions (DMPs) were screened, genes corresponding to DMPs were selected, and prognosis-related genes were identified. A representative DMP was used to divide the DMPs into hyper- and hypomethylated groups. Expression of key genes in cell lines was detected using quantitative real-time polymerase chain reaction and western blot analysis. After treatment of HepG2 cells with 5-Aza-2'-deoxycytidine (5-Aza-DC), gene expression was observed. Bisulfite sequencing PCR assay was used to detect methylation frequency. Overexpressed GRASP lentiviral vectors were constructed to analyze their influence on cell proliferation, migration, and invasion using cell counting kit-8 and transwell assays. Forty-three HCC prognosis-related genes were screened using the TCGA database. cg00249511 (SCT) was used to divide the DMPs into hyper- and hypomethylated groups, distinguishing between high- and low-risk samples. The prognosis survival model constructed using 12 genes revealed the prognosis type. GRASP messenger RNA was downregulated in HepG2 and upregulated after 5-Aza-DC treatment. In HCC tissues, methylation frequency of GRASP was upregulated. GRASP overexpression inhibited HepG2 cell proliferation, invasion, and G-CSFR expression. Thus, GRASP might be a prognosis-related gene controlled by methylation.
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
16215-16225Subventions
Organisme : Shanghai Municipal Science and Technology Commission Foundation
ID : 17401935000
Informations de copyright
© 2019 Wiley Periodicals, Inc.