Closed Genome Sequences of Clinical Neisseria gonorrhoeae Strains Obtained from Combined Oxford Nanopore and Illumina Sequencing.
Journal
Microbiology resource announcements
ISSN: 2576-098X
Titre abrégé: Microbiol Resour Announc
Pays: United States
ID NLM: 101728794
Informations de publication
Date de publication:
Feb 2019
Feb 2019
Historique:
received:
18
01
2019
accepted:
30
01
2019
entrez:
6
3
2019
pubmed:
6
3
2019
medline:
6
3
2019
Statut:
epublish
Résumé
Neisseria gonorrhoeae is the etiological agent of gonorrhea, the second most common notifiable disease in the United States. Here, we used a hybrid approach combining Oxford Nanopore Technologies MinION and Illumina MiSeq sequencing data to obtain closed genome sequences of nine clinical N. gonorrhoeae isolates.
Identifiants
pubmed: 30834380
doi: 10.1128/MRA.00072-19
pii: MRA00072-19
pmc: PMC6395865
pii:
doi:
Types de publication
Journal Article
Langues
eng
Subventions
Organisme : NIAID NIH HHS
ID : U19 AI110819
Pays : United States
Références
Antimicrob Agents Chemother. 2001 Sep;45(9):2651-4
pubmed: 11502546
Antimicrob Agents Chemother. 2005 Jan;49(1):137-43
pubmed: 15616287
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
PLoS One. 2014 Nov 19;9(11):e112963
pubmed: 25409509
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24
pubmed: 27342282
J Antimicrob Chemother. 2016 Nov;71(11):3109-3116
pubmed: 27432597
J Infect. 2016 Dec;73(6):578-587
pubmed: 27575582
Bioinformatics. 2017 Jun 1;33(11):1725-1726
pubmed: 28130240
J Clin Microbiol. 2017 May;55(5):1454-1468
pubmed: 28228492
J Antimicrob Chemother. 2017 Jul 1;72(7):1937-1947
pubmed: 28333355
Microb Genom. 2016 Aug 25;2(8):e000076
pubmed: 28348871
PLoS Comput Biol. 2017 Jun 8;13(6):e1005595
pubmed: 28594827
Nucleic Acids Res. 2018 Jan 4;46(D1):D851-D860
pubmed: 29112715
Microb Genom. 2017 Sep 14;3(10):e000132
pubmed: 29177090
MMWR Morb Mortal Wkly Rep. 2018 Apr 27;67(16):473-476
pubmed: 29698384
Lancet Infect Dis. 2018 Jul;18(7):758-768
pubmed: 29776807
J Bacteriol. 1985 Aug;163(2):430-8
pubmed: 2991186