The genome of the jellyfish Clytia hemisphaerica and the evolution of the cnidarian life-cycle.


Journal

Nature ecology & evolution
ISSN: 2397-334X
Titre abrégé: Nat Ecol Evol
Pays: England
ID NLM: 101698577

Informations de publication

Date de publication:
05 2019
Historique:
received: 17 07 2018
accepted: 30 01 2019
pubmed: 13 3 2019
medline: 12 10 2019
entrez: 13 3 2019
Statut: ppublish

Résumé

Jellyfish (medusae) are a distinctive life-cycle stage of medusozoan cnidarians. They are major marine predators, with integrated neurosensory, muscular and organ systems. The genetic foundations of this complex form are largely unknown. We report the draft genome of the hydrozoan jellyfish Clytia hemisphaerica and use multiple transcriptomes to determine gene use across life-cycle stages. Medusa, planula larva and polyp are each characterized by distinct transcriptome signatures reflecting abrupt life-cycle transitions and all deploy a mixture of phylogenetically old and new genes. Medusa-specific transcription factors, including many with bilaterian orthologues, associate with diverse neurosensory structures. Compared to Clytia, the polyp-only hydrozoan Hydra has lost many of the medusa-expressed transcription factors, despite similar overall rates of gene content evolution and sequence evolution. Absence of expression and gene loss among Clytia orthologues of genes patterning the anthozoan aboral pole, secondary axis and endomesoderm support simplification of planulae and polyps in Hydrozoa, including loss of bilateral symmetry. Consequently, although the polyp and planula are generally considered the ancestral cnidarian forms, in Clytia the medusa maximally deploys the ancestral cnidarian-bilaterian transcription factor gene complement.

Identifiants

pubmed: 30858591
doi: 10.1038/s41559-019-0833-2
pii: 10.1038/s41559-019-0833-2
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

801-810

Commentaires et corrections

Type : CommentIn

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Auteurs

Lucas Leclère (L)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Coralie Horin (C)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Sandra Chevalier (S)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Pascal Lapébie (P)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.
Architecture et Fonction des Macromolécules Biologiques, Aix-Marseille Université, Marseille, France.

Philippe Dru (P)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Sophie Peron (S)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Muriel Jager (M)

Evolution Paris-Seine, Institut de Biologie Paris-Seine, Sorbonne Université, CNRS, Paris, France.
Institut de Systématique, Evolution, Biodiversité (ISYEB UMR 7205), Sorbonne Université, MNHN, CNRS, EPHE, Paris, France.

Thomas Condamine (T)

Evolution Paris-Seine, Institut de Biologie Paris-Seine, Sorbonne Université, CNRS, Paris, France.

Karen Pottin (K)

Evolution Paris-Seine, Institut de Biologie Paris-Seine, Sorbonne Université, CNRS, Paris, France.
Laboratoire de Biologie du Développement (IBPS-LBD, UMR7622), Sorbonne Université, CNRS, Institut de Biologie Paris Seine, Paris, France.

Séverine Romano (S)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Julia Steger (J)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.
Laboratoire de Biologie du Développement (IBPS-LBD, UMR7622), Sorbonne Université, CNRS, Institut de Biologie Paris Seine, Paris, France.

Chiara Sinigaglia (C)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.
Institut de Génomique Fonctionnelle de Lyon, École Normale Supérieure de Lyon, CNRS UMR 5242-INRA USC 1370, Lyon cedex 07, France.

Carine Barreau (C)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Gonzalo Quiroga Artigas (G)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.
The Whitney Laboratory for Marine Bioscience, University of Florida, St. Augustine, FL, USA.

Antonella Ruggiero (A)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.
Centre de Recherche de Biologie cellulaire de Montpellier, CNRS UMR 5237, Université de Montpellier, Montpellier Cedex 5, France.

Cécile Fourrage (C)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.
Service de Génétique UMR 781, Hôpital Necker-APHP, Paris, France.

Johanna E M Kraus (JEM)

Department for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Vienna, Austria.
Sars International Centre for Marine Molecular Biology, University of Bergen, Bergen, Norway.

Julie Poulain (J)

Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France.

Jean-Marc Aury (JM)

Genoscope, Institut de Biologie François-Jacob, Commissariat à l'Energie Atomique, Université Paris-Saclay, Evry, France.

Patrick Wincker (P)

Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France.

Eric Quéinnec (E)

Evolution Paris-Seine, Institut de Biologie Paris-Seine, Sorbonne Université, CNRS, Paris, France.
Institut de Systématique, Evolution, Biodiversité (ISYEB UMR 7205), Sorbonne Université, MNHN, CNRS, EPHE, Paris, France.

Ulrich Technau (U)

Department for Molecular Evolution and Development, Centre of Organismal Systems Biology, University of Vienna, Vienna, Austria.

Michaël Manuel (M)

Evolution Paris-Seine, Institut de Biologie Paris-Seine, Sorbonne Université, CNRS, Paris, France.
Institut de Systématique, Evolution, Biodiversité (ISYEB UMR 7205), Sorbonne Université, MNHN, CNRS, EPHE, Paris, France.

Tsuyoshi Momose (T)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Evelyn Houliston (E)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France.

Richard R Copley (RR)

Laboratoire de Biologie du Développement de Villefranche-sur-mer, Sorbonne Université, CNRS, Villefranche-sur-mer, France. copley@obs-vlfr.fr.

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