Solid-state nanopore hydrodynamics and transport.
Journal
Biomicrofluidics
ISSN: 1932-1058
Titre abrégé: Biomicrofluidics
Pays: United States
ID NLM: 101293825
Informations de publication
Date de publication:
Jan 2019
Jan 2019
Historique:
received:
25
06
2018
accepted:
31
12
2018
entrez:
15
3
2019
pubmed:
15
3
2019
medline:
15
3
2019
Statut:
epublish
Résumé
The resistive pulse method based on measuring the ion current trace as a biomolecule passing through a nanopore has become an important tool in biotechnology for characterizing molecules. A detailed physical understanding of the translocation process is essential if one is to extract the relevant molecular properties from the current signal. In this Perspective, we review some recent progress in our understanding of hydrodynamic flow and transport through nanometer sized pores. We assume that the problems of interest can be addressed through the use of the continuum version of the equations of hydrodynamic and ion transport. Thus, our discussion is restricted to pores of diameter greater than about ten nanometers: such pores are usually synthetic. We address the fundamental nanopore hydrodynamics and ion transport mechanisms and review the wealth of observed phenomena due to these mechanisms. We also suggest future ionic circuits that can be synthesized from different ionic modules based on these phenomena and their applications.
Identifiants
pubmed: 30867871
doi: 10.1063/1.5083913
pii: 1.5083913
pii: 005901BMF
pmc: PMC6404949
doi:
Types de publication
Journal Article
Langues
eng
Pagination
011301Références
Phys Rev Lett. 1996 Jul 22;77(4):783-786
pubmed: 10062901
Biophys J. 1999 Oct;77(4):1824-38
pubmed: 10512806
Proc Natl Acad Sci U S A. 2000 Feb 1;97(3):1079-84
pubmed: 10655487
Phys Rev Lett. 2001 Apr 2;86(14):3188-91
pubmed: 11290139
Phys Rev Lett. 2001 Apr 9;86(15):3435-8
pubmed: 11327989
Nature. 2001 Oct 18;413(6857):748-52
pubmed: 11607035
Chem Rev. 2000 Jul 12;100(7):2575-2594
pubmed: 11749296
J Gen Physiol. 1975 Oct;66(4):531-2
pubmed: 1181379
Acc Chem Res. 2002 Oct;35(10):817-25
pubmed: 12379134
Phys Rev Lett. 2002 Nov 4;89(19):198103
pubmed: 12443155
Electrophoresis. 2004 Jan;25(2):187-202
pubmed: 14743473
Electrophoresis. 2004 Jan;25(2):203-13
pubmed: 14743474
J Biol Chem. 2004 Apr 9;279(15):14473-6
pubmed: 14973134
J Am Chem Soc. 2004 Dec 8;126(48):15646-7
pubmed: 15571378
Phys Rev Lett. 2005 Feb 4;94(4):048102
pubmed: 15783605
Nano Lett. 2005 Jul;5(7):1193-7
pubmed: 16178209
Nano Lett. 2006 Jan;6(1):89-95
pubmed: 16402793
Phys Rev Lett. 2006 Jan 27;96(3):038302
pubmed: 16486779
Nature. 2006 Mar 16;440(7082):297-302
pubmed: 16541064
Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Oct;74(4 Pt 1):041901
pubmed: 17155090
Biophys J. 2007 Mar 1;92(5):1632-7
pubmed: 17158571
Annu Rev Biophys Biomol Struct. 2007;36:435-50
pubmed: 17311526
Phys Rev Lett. 2007 May 11;98(19):198102
pubmed: 17677664
Phys Rev Lett. 2007 Jun 8;98(23):238104
pubmed: 17677940
Nat Nanotechnol. 2007 Apr;2(4):209-15
pubmed: 18654264
Nano Lett. 2008 Oct;8(10):3418-22
pubmed: 18759490
Nat Biotechnol. 2008 Oct;26(10):1146-53
pubmed: 18846088
Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Aug;78(2 Pt 1):021912
pubmed: 18850870
J Am Chem Soc. 2009 Feb 18;131(6):2070-1
pubmed: 19159287
J Am Chem Soc. 2009 Apr 15;131(14):5194-202
pubmed: 19317490
J Am Chem Soc. 2009 Jun 17;131(23):8211-20
pubmed: 19507907
Chem Soc Rev. 2009 Aug;38(8):2360-84
pubmed: 19623355
ACS Nano. 2009 Oct 27;3(10):3009-14
pubmed: 19751064
Biomed Microdevices. 2010 Apr;12(2):235-45
pubmed: 19943114
Chem Soc Rev. 2010 Mar;39(3):1115-32
pubmed: 20179828
Nano Lett. 2010 Jun 9;10(6):2162-7
pubmed: 20438117
Nano Lett. 2010 Jul 14;10(7):2493-7
pubmed: 20515038
Nano Lett. 2010 Aug 11;10(8):3163-7
pubmed: 20608744
Nature. 2010 Sep 9;467(7312):190-3
pubmed: 20720538
Anal Chem. 2010 Oct 1;82(19):8217-25
pubmed: 20804162
Nature. 2010 Sep 9;467(7312):164-5
pubmed: 20829786
J Phys Condens Matter. 2010 Nov 17;22(45):454113
pubmed: 21339600
J Phys Condens Matter. 2010 Nov 17;22(45):454123
pubmed: 21339610
ACS Nano. 2011 Jul 26;5(7):5509-18
pubmed: 21662982
J R Soc Interface. 2011 Oct 7;8(63):1369-78
pubmed: 21715402
Nanotechnology. 2008 Feb 27;19(8):085713
pubmed: 21730744
Nanoscale. 2012 Feb 21;4(4):1068-77
pubmed: 22081018
Nano Lett. 2012 Jan 11;12(1):512-7
pubmed: 22196850
Nanoscale. 2012 Apr 21;4(8):2685-93
pubmed: 22422141
Lab Chip. 2012 May 7;12(9):1710-6
pubmed: 22441654
Phys Life Rev. 2012 Jun;9(2):125-58
pubmed: 22658507
Nano Lett. 2012 Aug 8;12(8):4037-44
pubmed: 22746297
Nano Lett. 2012 Aug 8;12(8):4159-63
pubmed: 22803839
Biophys J. 2012 Jul 18;103(2):352-6
pubmed: 22853913
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Jul;86(1 Pt 1):011921
pubmed: 23005466
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Aug;86(2 Pt 1):021503
pubmed: 23005765
J Am Chem Soc. 2013 Jan 9;135(1):322-9
pubmed: 23210472
ACS Nano. 2013 Feb 26;7(2):1408-14
pubmed: 23259840
Philos Trans R Soc Lond B Biol Sci. 2012 Dec 24;368(1611):20120027
pubmed: 23267181
J Chem Phys. 2013 Jan 28;138(4):044706
pubmed: 23387614
Lab Chip. 2013 May 21;13(10):1859-62
pubmed: 23563625
ACS Nano. 2013 May 28;7(5):4129-34
pubmed: 23607870
Nano Lett. 2013 Jun 12;13(6):2798-802
pubmed: 23611491
Nanotechnology. 2013 Jun 21;24(24):245202
pubmed: 23689946
ACS Nano. 2013 Jul 23;7(7):6024-30
pubmed: 23734828
Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12192-6
pubmed: 23836648
ACS Appl Mater Interfaces. 2013 Oct 9;5(19):9330-7
pubmed: 24041089
Nano Lett. 2013 Nov 13;13(11):5141-6
pubmed: 24124664
Biomicrofluidics. 2013 Dec 04;7(6):61102
pubmed: 24396534
Nat Rev Genet. 2014 Feb;15(2):121-32
pubmed: 24434847
Nano Lett. 2014 Mar 12;14(3):1270-4
pubmed: 24484535
ACS Nano. 2014 Mar 25;8(3):3023-30
pubmed: 24588582
Langmuir. 2014 Aug 12;30(31):9261-72
pubmed: 25020257
Nanoscale. 2014 Nov 6;6(23):14121-32
pubmed: 25325422
Anal Chem. 2015 Jan 6;87(1):188-99
pubmed: 25387066
Anal Chem. 2015 Jan 6;87(1):172-87
pubmed: 25405581
Phys Fluids (1994). 2014 Nov;26(11):112004
pubmed: 25489206
Genomics Proteomics Bioinformatics. 2015 Feb;13(1):4-16
pubmed: 25743089
Analyst. 2015 Jul 21;140(14):4779-91
pubmed: 25988434
Anal Chem. 2015 Aug 18;87(16):8227-33
pubmed: 26202979
Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Aug;92(2):022715
pubmed: 26382440
J Chem Phys. 2015 Dec 14;143(22):224705
pubmed: 26671394
J Chem Phys. 2015 Dec 14;143(22):224706
pubmed: 26671395
Nanoscale. 2016 Jan 21;8(3):1565-71
pubmed: 26689931
Lab Chip. 2016 Apr 7;16(7):1171-7
pubmed: 26960551
Nat Nanotechnol. 2016 Jul;11(7):645-51
pubmed: 27043197
Biomicrofluidics. 2016 May 05;10(3):032902
pubmed: 27190565
Langmuir. 2016 Sep 20;32(37):9445-50
pubmed: 27564689
Phys Rev E. 2016 Aug;94(2-1):022613
pubmed: 27627366
Phys Rev Lett. 2016 Sep 23;117(13):134301
pubmed: 27715110
Anal Chem. 2017 Jan 3;89(1):157-188
pubmed: 28105845
Nat Methods. 2017 Mar 31;14(4):347-348
pubmed: 28362434
Nano Lett. 2017 Sep 13;17(9):5199-5205
pubmed: 28829136
Nat Commun. 2017 Aug 30;8(1):380
pubmed: 28855527
Adv Colloid Interface Sci. 2017 Dec;250:195-213
pubmed: 28942265
Genomics. 1988 Apr;2(3):231-9
pubmed: 3294162
J Theor Biol. 1982 Nov 21;99(2):237-47
pubmed: 6188926
Proc Natl Acad Sci U S A. 1996 Nov 26;93(24):13770-3
pubmed: 8943010