Performance comparison of linear and non-linear feature selection methods for the analysis of large survey datasets.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2019
Historique:
received: 22 02 2018
accepted: 25 02 2019
entrez: 22 3 2019
pubmed: 22 3 2019
medline: 4 12 2019
Statut: epublish

Résumé

Large survey databases for aging-related analysis are often examined to discover key factors that affect a dependent variable of interest. Typically, this analysis is performed with methods assuming linear dependencies between variables. Such assumptions however do not hold in many cases, wherein data are linked by way of non-linear dependencies. This in turn requires applications of analytic methods, which are more accurate in identifying potentially non-linear dependencies. Here, we objectively compared the feature selection performance of several frequently-used linear selection methods and three non-linear selection methods in the context of large survey data. These methods were assessed using both synthetic and real-world datasets, wherein relationships between the features and dependent variables were known in advance. In contrast to linear methods, we found that the non-linear methods offered better overall feature selection performance than linear methods in all usage conditions. Moreover, the performance of the non-linear methods was more stable, being unaffected by the inclusion or exclusion of variables from the datasets. These properties make non-linear feature selection methods a potentially preferable tool for both hypothesis-driven and exploratory analyses for aging-related datasets.

Identifiants

pubmed: 30897097
doi: 10.1371/journal.pone.0213584
pii: PONE-D-18-05871
pmc: PMC6428288
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0213584

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

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Auteurs

Olga Krakovska (O)

Digital Health Hub, Simon Fraser University, Surrey, British Columbia, Canada.
Science and Technology for Aging Research Institute, Simon Fraser University, Surrey, British Columbia, Canada.
Department of Gerontology, Simon Fraser University, Vancouver, British Columbia, Canada.

Gregory Christie (G)

Digital Health Hub, Simon Fraser University, Surrey, British Columbia, Canada.
Science and Technology for Aging Research Institute, Simon Fraser University, Surrey, British Columbia, Canada.

Andrew Sixsmith (A)

Digital Health Hub, Simon Fraser University, Surrey, British Columbia, Canada.
Science and Technology for Aging Research Institute, Simon Fraser University, Surrey, British Columbia, Canada.
Department of Gerontology, Simon Fraser University, Vancouver, British Columbia, Canada.

Martin Ester (M)

Department of Computer Science, Simon Fraser University, Vancouver, British Columbia, Canada.

Sylvain Moreno (S)

Digital Health Hub, Simon Fraser University, Surrey, British Columbia, Canada.
Science and Technology for Aging Research Institute, Simon Fraser University, Surrey, British Columbia, Canada.
School of Interactive Arts and Technology, Simon Fraser University, Surrey, British Columbia, Canada.

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