Quantitative Systems Pharmacological Analysis of Drugs of Abuse Reveals the Pleiotropy of Their Targets and the Effector Role of mTORC1.
cellular pathways
drug abuse
drug-target interactions
mTOR complex 1
machine learning
neurotransmission
pleiotropic proteins
quantitative systems pharmacology
Journal
Frontiers in pharmacology
ISSN: 1663-9812
Titre abrégé: Front Pharmacol
Pays: Switzerland
ID NLM: 101548923
Informations de publication
Date de publication:
2019
2019
Historique:
received:
08
11
2018
accepted:
14
02
2019
entrez:
26
3
2019
pubmed:
25
3
2019
medline:
25
3
2019
Statut:
epublish
Résumé
Existing treatments against drug addiction are often ineffective due to the complexity of the networks of protein-drug and protein-protein interactions (PPIs) that mediate the development of drug addiction and related neurobiological disorders. There is an urgent need for understanding the molecular mechanisms that underlie drug addiction toward designing novel preventive or therapeutic strategies. The rapidly accumulating data on addictive drugs and their targets as well as advances in machine learning methods and computing technology now present an opportunity to systematically mine existing data and draw inferences on potential new strategies. To this aim, we carried out a comprehensive analysis of cellular pathways implicated in a diverse set of 50 drugs of abuse using quantitative systems pharmacology methods. The analysis of the drug/ligand-target interactions compiled in DrugBank and STITCH databases revealed 142 known and 48 newly predicted targets, which have been further analyzed to identify the KEGG pathways enriched at different stages of drug addiction cycle, as well as those implicated in cell signaling and regulation events associated with drug abuse. Apart from synaptic neurotransmission pathways detected as upstream signaling modules that "sense" the early effects of drugs of abuse, pathways involved in neuroplasticity are distinguished as determinants of neuronal morphological changes. Notably, many signaling pathways converge on important targets such as mTORC1. The latter emerges as a universal effector of the persistent restructuring of neurons in response to continued use of drugs of abuse.
Identifiants
pubmed: 30906261
doi: 10.3389/fphar.2019.00191
pmc: PMC6418047
doi:
Types de publication
Journal Article
Langues
eng
Pagination
191Subventions
Organisme : NIDA NIH HHS
ID : P30 DA035778
Pays : United States
Organisme : NIGMS NIH HHS
ID : P41 GM103712
Pays : United States
Références
Nat Neurosci. 1998 Jun;1(2):132-7
pubmed: 10195128
Neuropsychopharmacology. 2001 Feb;24(2):97-129
pubmed: 11120394
Biochem Pharmacol. 1975 Apr 15;24(8):847-52
pubmed: 1125084
CMAJ. 2001 Mar 20;164(6):817-21
pubmed: 11276551
Br J Pharmacol. 2001 Oct;134(4):871-9
pubmed: 11606328
Annu Rev Cell Dev Biol. 2002;18:601-35
pubmed: 12142283
Mol Psychiatry. 2002;7(8):837-44
pubmed: 12232776
Nat Neurosci. 2002 Dec;5(12):1263-4
pubmed: 12436114
Anesth Analg. 2002 Dec;95(6):1607-10, table of contents
pubmed: 12456425
Mol Pharmacol. 2003 Feb;63(2):429-38
pubmed: 12527815
J Clin Invest. 2003 May;111(10):1444-51
pubmed: 12750391
Anesth Analg. 2003 Jul;97(1):104-10, table of contents
pubmed: 12818951
J Neurosci Res. 2003 Oct 1;74(1):91-6
pubmed: 13130510
Neurogastroenterol Motil. 2004 Oct;16 Suppl 2:17-28
pubmed: 15357848
Curr Opin Pharmacol. 2005 Feb;5(1):20-5
pubmed: 15661621
Mol Cell Neurosci. 2005 Feb;28(2):275-91
pubmed: 15691709
Neuroscience. 2005;132(3):553-60
pubmed: 15837117
Nat Neurosci. 2005 Nov;8(11):1481-9
pubmed: 16251991
Neuropsychopharmacology. 2007 Feb;32(2):354-66
pubmed: 16541082
Neuropsychopharmacology. 2008 Jul;33(8):1779-97
pubmed: 17928814
PLoS Comput Biol. 2008 Jan;4(1):e2
pubmed: 18179280
Prog Brain Res. 2008;169:199-207
pubmed: 18394475
J Neurosci. 2008 May 14;28(20):5383-93
pubmed: 18480294
Drug News Perspect. 2008 Apr;21(3):149-57
pubmed: 18560613
Addict Biol. 2009 Apr;14(2):119-29
pubmed: 18811678
Nat Rev Mol Cell Biol. 2009 May;10(5):307-18
pubmed: 19339977
Eur J Pharmacol. 2009 Aug 1;615(1-3):108-12
pubmed: 19470385
Science. 1991 Oct 25;254(5031):576-8
pubmed: 1948034
Nat Neurosci. 2009 Sep;12(9):1152-8
pubmed: 19648913
Neuropsychopharmacology. 2010 Jan;35(1):217-38
pubmed: 19710631
Trends Neurosci. 2010 Jun;33(6):267-76
pubmed: 20207024
Science. 2010 Jul 9;329(5988):229-32
pubmed: 20522742
Neuroscience. 2010 Nov 24;171(1):134-43
pubmed: 20826199
Physiol Res. 2011;60(1):15-25
pubmed: 20945968
Proc Natl Acad Sci U S A. 2010 Nov 16;107(46):20093-8
pubmed: 21041654
J Neurochem. 2011 Jan;116(2):164-76
pubmed: 21073468
Addict Biol. 2012 Mar;17(2):248-58
pubmed: 21392180
Mol Psychiatry. 2011 Oct;16(10):974-86
pubmed: 21519339
Neuropharmacology. 2011 Jul-Aug;61(1-2):283-92
pubmed: 21545805
Biol Psychiatry. 2011 Sep 15;70(6):575-82
pubmed: 21549353
Front Neuroanat. 2011 Sep 20;5:60
pubmed: 21960960
Autophagy. 2011 Nov;7(11):1359-70
pubmed: 21997369
Anesthesiology. 2011 Dec;115(6):1363-81
pubmed: 22020140
Front Pharmacol. 2012 Feb 06;3:13
pubmed: 22347189
Int J Neuropsychopharmacol. 2013 Mar;16(2):271-8
pubmed: 22717047
Annu Rev Psychol. 2013;64:21-47
pubmed: 22804774
PLoS One. 2012;7(7):e41394
pubmed: 22815997
Neurology. 2012 Aug 21;79(8):807-14
pubmed: 22915176
Nature. 2012 Oct 11;490(7419):262-6
pubmed: 23034651
Trends Neurosci. 2013 Apr;36(4):227-36
pubmed: 23237660
Cell Commun Signal. 2013 Feb 20;11(1):13
pubmed: 23425659
Curr Opin Neurobiol. 2013 Aug;23(4):507-12
pubmed: 23428655
Int J Neuropsychopharmacol. 2014 Jan;17(1):127-36
pubmed: 24103337
Neuropsychopharmacology. 2014 Jan;39(2):254-62
pubmed: 24121188
J Biomed Sci. 2013 Oct 21;20:77
pubmed: 24143922
J Chem Inf Model. 2013 Dec 23;53(12):3399-409
pubmed: 24289468
Dialogues Clin Neurosci. 2013 Dec;15(4):431-43
pubmed: 24459410
Neuropsychopharmacology. 2014 Jun;39(7):1694-702
pubmed: 24469593
Front Pharmacol. 2014 Feb 06;5:3
pubmed: 24567719
Cell Death Dis. 2014 Mar 06;5:e1099
pubmed: 24603327
Subst Abuse Rehabil. 2013 Feb 08;4:29-43
pubmed: 24648786
J Neurochem. 2014 Jul;130(2):172-84
pubmed: 24666346
Brief Bioinform. 2015 Mar;16(2):325-37
pubmed: 24723570
Neuroscience. 2014 Sep 5;275:184-93
pubmed: 24950119
Sci Rep. 2014 Sep 01;4:6245
pubmed: 25175563
Bioinformatics. 2015 Jan 1;31(1):131-3
pubmed: 25192741
Neuron. 2014 Oct 22;84(2):275-91
pubmed: 25374355
Pharmacol Rev. 2015;67(1):176-97
pubmed: 25505168
Science. 2015 Jan 23;347(6220):1260419
pubmed: 25613900
BMC Biochem. 2015 Apr 30;16:11
pubmed: 25924612
Autophagy. 2015;11(7):995-1009
pubmed: 26043790
Cell. 2015 Aug 13;162(4):712-25
pubmed: 26276628
Brief Bioinform. 2016 Jul;17(4):696-712
pubmed: 26283676
J Biol Chem. 2015 Dec 11;290(50):29742-57
pubmed: 26494620
Nucleic Acids Res. 2016 Jan 4;44(D1):D380-4
pubmed: 26590256
Neuropharmacology. 2016 Mar;102:216-28
pubmed: 26596557
Elife. 2015 Nov 30;4:e10778
pubmed: 26618907
Prog Mol Biol Transl Sci. 2016;137:1-40
pubmed: 26809997
N Engl J Med. 2016 Jan 28;374(4):363-71
pubmed: 26816013
Neuron. 2016 Feb 3;89(3):566-82
pubmed: 26844834
J Biomol Screen. 2016 Jul;21(6):521-34
pubmed: 26962875
Sci Signal. 2016 Jul 12;9(436):ra70
pubmed: 27405980
Lancet Psychiatry. 2016 Aug;3(8):760-73
pubmed: 27475769
Sci Rep. 2016 Sep 02;6:32595
pubmed: 27586516
Oncol Rep. 2016 Dec;36(6):3363-3370
pubmed: 27779694
Nucleic Acids Res. 2017 Jan 4;45(D1):D353-D361
pubmed: 27899662
Alcohol Alcohol. 2017 Mar 9;52(2):172-179
pubmed: 28043969
Cell. 2017 Mar 9;168(6):960-976
pubmed: 28283069
Autophagy. 2017 Sep 2;13(9):1496-1511
pubmed: 28722508
Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082
pubmed: 29126136
Essays Biochem. 2017 Dec 12;61(6):565-584
pubmed: 29233869
Sci Rep. 2017 Dec 14;7(1):17605
pubmed: 29242632
Sci Rep. 2017 Dec 19;7(1):17803
pubmed: 29259176
Sci Rep. 2018 Feb 13;8(1):2894
pubmed: 29440730
J Pharmacol Exp Ther. 1985 Jun;233(3):597-602
pubmed: 2989489
Sci Rep. 2018 Jun 18;8(1):9231
pubmed: 29915338
J Physiol. 1983 Jan;334:33-46
pubmed: 6306230
Annu Rev Neurosci. 1995;18:463-95
pubmed: 7605071
J R Soc Med. 1996 Jul;89(7):396-400
pubmed: 8774539
Annu Rev Neurosci. 1996;19:319-40
pubmed: 8833446
Pharmacol Toxicol. 1995 Dec;77(6):355-9
pubmed: 8835358
Br J Pharmacol. 1996 Aug;118(8):2023-8
pubmed: 8864538
Drug Alcohol Depend. 1997 Mar 14;44(2-3):175-82
pubmed: 9088790
Nature. 1997 Apr 24;386(6627):827-30
pubmed: 9126740
Proc Natl Acad Sci U S A. 1998 Jun 23;95(13):7699-704
pubmed: 9636213