Pandoravirus Celtis Illustrates the Microevolution Processes at Work in the Giant

Acanthamoeba comparative genomics de novo gene creation giant viruses hAT transposase soil viruses

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2019
Historique:
received: 18 12 2018
accepted: 19 02 2019
entrez: 26 3 2019
pubmed: 25 3 2019
medline: 25 3 2019
Statut: epublish

Résumé

With genomes of up to 2.7 Mb propagated in μm-long oblong particles and initially predicted to encode more than 2000 proteins, members of the

Identifiants

pubmed: 30906288
doi: 10.3389/fmicb.2019.00430
pmc: PMC6418002
doi:

Types de publication

Journal Article

Langues

eng

Pagination

430

Références

Trends Genet. 2000 Jun;16(6):276-7
pubmed: 10827456
Nucleic Acids Res. 2002 Jul 15;30(14):3059-66
pubmed: 12136088
Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W327-31
pubmed: 15215404
J Mol Biol. 2004 Nov 26;344(3):797-811
pubmed: 15533446
J Theor Biol. 2006 Mar 21;239(2):226-35
pubmed: 16239014
J Mol Biol. 2006 May 5;358(3):922-33
pubmed: 16551468
Cell. 2007 Feb 9;128(3):613-24
pubmed: 17289578
Bioinformatics. 2007 Apr 15;23(8):1026-8
pubmed: 17309896
Mol Biol Evol. 2007 Aug;24(8):1586-91
pubmed: 17483113
EMBO Rep. 2007 Aug;8(8):737-42
pubmed: 17668004
Protein Sci. 2010 Apr;19(4):786-95
pubmed: 20162614
Nat Commun. 2010 Sep 21;1:77
pubmed: 20865802
Nat Biotechnol. 2011 May 15;29(7):644-52
pubmed: 21572440
J Bacteriol. 2011 Oct;193(19):5587-8
pubmed: 21914892
Nat Rev Microbiol. 2011 Nov 08;10(1):13-26
pubmed: 22064560
Nat Methods. 2011 Dec 25;9(2):173-5
pubmed: 22198341
Adv Virus Res. 2013;85:25-56
pubmed: 23439023
Nat Methods. 2013 Jun;10(6):563-9
pubmed: 23644548
Science. 2013 Jul 19;341(6143):281-6
pubmed: 23869018
Biol Direct. 2013 Oct 23;8:25
pubmed: 24148757
Ann N Y Acad Sci. 2015 Apr;1341:10-24
pubmed: 25727355
Genome Announc. 2015 Mar 26;3(2):null
pubmed: 25814595
Genome Biol. 2015 Aug 06;16:157
pubmed: 26243257
Microbiol Spectr. 2015 Aug;3(4):null
pubmed: 26350319
Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):E5327-35
pubmed: 26351664
FEMS Microbiol Rev. 2015 Nov;39(6):779-96
pubmed: 26391910
Front Microbiol. 2016 Mar 22;7:349
pubmed: 27047465
Ann N Y Acad Sci. 2017 Feb;1389(1):52-75
pubmed: 27723934
Science. 2017 Apr 7;356(6333):82-85
pubmed: 28386012
Nat Commun. 2017 Apr 21;8:15087
pubmed: 28429720
J Virol. 2017 Jul 26;:
pubmed: 28747494
Mol Biol Evol. 2018 Feb 1;35(2):518-522
pubmed: 29077904
Genome Biol Evol. 2018 Apr 1;10(4):1120-1126
pubmed: 29659807
Mol Biol Evol. 2018 Jun 1;35(6):1547-1549
pubmed: 29722887
Nat Commun. 2018 Jun 11;9(1):2285
pubmed: 29891839
Mob DNA. 2018 Jun 18;9:19
pubmed: 29946369
Front Microbiol. 2018 Jul 10;9:1486
pubmed: 30042742
Nat Ecol Evol. 2018 Oct;2(10):1626-1632
pubmed: 30201962
Nucleic Acids Res. 2019 Jan 8;47(D1):D23-D28
pubmed: 30395293
Med Sci (Paris). 2018 Dec;34(12):1087-1091
pubmed: 30623766

Auteurs

Matthieu Legendre (M)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Jean-Marie Alempic (JM)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Nadège Philippe (N)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Audrey Lartigue (A)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Sandra Jeudy (S)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Olivier Poirot (O)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Ngan Thi Ta (NT)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Sébastien Nin (S)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Yohann Couté (Y)

Inserm, BIG-BGE, CEA, Université Grenoble Alpes, Grenoble, France.

Chantal Abergel (C)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Jean-Michel Claverie (JM)

Aix Marseille Univ, CNRS, IGS, Structural and Genomic Information Laboratory (UMR7256), Mediterranean Institute of Microbiology (FR3479), Marseille, France.

Classifications MeSH