Darkening of the Greenland Ice Sheet: Fungal Abundance and Diversity Are Associated With Algal Bloom.

Greenland Ice Sheet NGS albedo effect bacteria dark ice fungi ice algae microbial diversity

Journal

Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977

Informations de publication

Date de publication:
2019
Historique:
received: 27 11 2018
accepted: 04 03 2019
entrez: 6 4 2019
pubmed: 6 4 2019
medline: 6 4 2019
Statut: epublish

Résumé

Recent studies have highlighted the importance of ice-algal blooms in driving darkening and therefore surface melt of the Greenland Ice Sheet (GrIS). However, the contribution of fungal and bacterial communities to this microbially driven albedo reduction remains unconstrained. To address this significant knowledge gap, fungi were isolated from key GrIS surface habitats (surface ice containing varying abundance of ice algae, supraglacial water, cryoconite holes, and snow), and a combination of cultivation and sequencing methods utilized to characterize the algal-associated fungal and bacterial diversity and abundance. Six hundred and ninety-seven taxa of fungi were obtained by amplicon sequencing and more than 200 fungal cultures belonging to 46 different species were isolated through cultivation approaches. Basidiomycota dominated in surface ice and water samples, and Ascomycota in snow samples. Amplicon sequencing revealed that bacteria were characterized by a higher diversity (883 taxa detected). Results from cultivation as well as ergosterol analyses suggested that surface ice dominated by ice algae and cryoconite holes supported the highest fungal biomass (10

Identifiants

pubmed: 30949152
doi: 10.3389/fmicb.2019.00557
pmc: PMC6437116
doi:

Types de publication

Journal Article

Langues

eng

Pagination

557

Références

FEMS Microbiol Ecol. 2018 Mar 1;94(3):
pubmed: 29444265
New Phytol. 2018 Mar;217(4):1428-1434
pubmed: 29318635
Mol Phylogenet Evol. 2003 Dec;29(3):629-40
pubmed: 14615198
Mol Ecol. 2014 Jul;23(13):3258-72
pubmed: 24689939
Curr Microbiol. 2010 Apr;60(4):307-14
pubmed: 19967375
J Comput Aided Mol Des. 2012 Aug;26(8):947-61
pubmed: 22710891
Nucleic Acids Res. 2013 Jan 7;41(1):e1
pubmed: 22933715
Extremophiles. 2011 Sep;15(5):573-86
pubmed: 21796441
FEMS Microbiol Ecol. 2008 Apr;64(1):9-27
pubmed: 18328084
Environ Microbiol. 2015 Mar;17(3):594-609
pubmed: 24593847
Mol Ecol. 2016 Aug;25(15):3752-67
pubmed: 27261672
Appl Environ Microbiol. 2016 Nov 21;82(24):7217-7226
pubmed: 27736792
Mycorrhiza. 2009 Nov;20(1):1-11
pubmed: 19495811
FEMS Microbiol Ecol. 2008 Jan;63(1):73-83
pubmed: 18067577
Sci Rep. 2017 Nov 10;7(1):15348
pubmed: 29127335
FEMS Microbiol Ecol. 2012 Nov;82(2):254-67
pubmed: 22168226
FEMS Microbiol Ecol. 2007 Feb;59(2):255-64
pubmed: 17328766
Trends Ecol Evol. 2012 Apr;27(4):219-25
pubmed: 22000675
Nat Methods. 2016 Jul;13(7):581-3
pubmed: 27214047
Front Microbiol. 2014 Nov 26;5:615
pubmed: 25505450
Appl Environ Microbiol. 2008 Feb;74(3):840-9
pubmed: 18083877
Environ Microbiol. 2004 Oct;6(10):1096-101
pubmed: 15344935
Microb Ecol. 2016 Aug;72(2):295-304
pubmed: 27147245
Appl Environ Microbiol. 2006 May;72(5):3685-95
pubmed: 16672518
FEMS Microbiol Ecol. 2010 Jun;72(3):354-69
pubmed: 20402775
Extremophiles. 2010 Mar;14(2):205-12
pubmed: 20066448
ISME J. 2012 Dec;6(12):2302-13
pubmed: 23018772
Nat Commun. 2018 Mar 14;9(1):1065
pubmed: 29540720
FEMS Microbiol Ecol. 2016 Feb;92(2):
pubmed: 26691594
Front Microbiol. 2015 Mar 11;6:179
pubmed: 25814983
Mycol Res. 2007 Jan;111(Pt 1):3-49
pubmed: 17307120
ISME J. 2012 Mar;6(3):610-8
pubmed: 22134646
New Phytol. 2011 Jul;191(2):515-527
pubmed: 21463329
Appl Environ Microbiol. 1979 May;37(5):959-64
pubmed: 485140
Mol Biol Evol. 2011 Oct;28(10):2731-9
pubmed: 21546353
Mycologia. 2005 Jan-Feb;97(1):45-9
pubmed: 16389955
Extremophiles. 2013 Jan;17(1):63-73
pubmed: 23132550
FEMS Microbiol Ecol. 2012 Nov;82(2):279-86
pubmed: 22304437
Trends Plant Sci. 2016 Jun;21(6):467-476
pubmed: 26895731
Mycologia. 2005 May-Jun;97(3):695-709
pubmed: 16392257
Cryobiology. 2014 Feb;68(1):122-8
pubmed: 24463093
Appl Environ Microbiol. 1995 Apr;61(4):1323-30
pubmed: 7747954
Stud Mycol. 2008;61:1-20
pubmed: 19287523
Appl Environ Microbiol. 2003 Nov;69(11):6610-9
pubmed: 14602620
Environ Microbiol. 2009 Dec;11(12):3166-78
pubmed: 19671076
Microb Ecol. 2006 Aug;52(2):207-16
pubmed: 16897300
New Phytol. 2010 Apr;186(2):281-5
pubmed: 20409185
PLoS One. 2015 Mar 23;10(3):e0119966
pubmed: 25799273
Int J Syst Evol Microbiol. 2008 Dec;58(Pt 12):2977-82
pubmed: 19060092
Can J Microbiol. 2011 Apr;57(4):263-72
pubmed: 21491977
Front Microbiol. 2015 Mar 24;6:225
pubmed: 25852678
Appl Environ Microbiol. 1980 Mar;39(3):488-92
pubmed: 7387151
Extremophiles. 2003 Dec;7(6):435-42
pubmed: 12845553
ISME J. 2011 Jan;5(1):150-60
pubmed: 20664552
Antonie Van Leeuwenhoek. 2007 Apr;91(3):277-89
pubmed: 17072534
FEMS Microbiol Ecol. 2012 Mar;79(3):638-48
pubmed: 22092588
Front Microbiol. 2015 Apr 20;6:307
pubmed: 25941518
FEMS Microbiol Ecol. 2007 Feb;59(2):318-30
pubmed: 17313581
Appl Environ Microbiol. 2004 Jul;70(7):3954-9
pubmed: 15240269
FEMS Microbiol Ecol. 2007 Apr;60(1):60-73
pubmed: 17381525
Front Microbiol. 2015 Mar 20;6:193
pubmed: 25852658
Nat Methods. 2010 May;7(5):335-6
pubmed: 20383131
Appl Environ Microbiol. 1985 Jan;49(1):1-7
pubmed: 3883894
J Mol Biol. 1990 Oct 5;215(3):403-10
pubmed: 2231712
Nucleic Acids Res. 2004 Mar 19;32(5):1792-7
pubmed: 15034147
Syst Biol. 2010 May;59(3):307-21
pubmed: 20525638

Auteurs

Laura Perini (L)

Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.

Cene Gostinčar (C)

Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.
Department of Molecular and Biomedical Sciences, Jožef Stefan Institute, Ljubljana, Slovenia.

Alexandre Magno Anesio (AM)

Bristol Glaciology Centre, School of Geographical Sciences, University of Bristol, Bristol, United Kingdom.
Department of Environmental Science, Aarhus University, Roskilde, Denmark.

Christopher Williamson (C)

Bristol Glaciology Centre, School of Geographical Sciences, University of Bristol, Bristol, United Kingdom.

Martyn Tranter (M)

Bristol Glaciology Centre, School of Geographical Sciences, University of Bristol, Bristol, United Kingdom.

Nina Gunde-Cimerman (N)

Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.

Classifications MeSH