Deep-learning for seizure forecasting in canines with epilepsy.


Journal

Journal of neural engineering
ISSN: 1741-2552
Titre abrégé: J Neural Eng
Pays: England
ID NLM: 101217933

Informations de publication

Date de publication:
06 2019
Historique:
pubmed: 9 4 2019
medline: 4 6 2020
entrez: 9 4 2019
Statut: ppublish

Résumé

This paper introduces a fully automated, subject-specific deep-learning convolutional neural network (CNN) system for forecasting seizures using ambulatory intracranial EEG (iEEG). The system was tested on a hand-held device (Mayo Epilepsy Assist Device) in a pseudo-prospective mode using iEEG from four canines with naturally occurring epilepsy. The system was trained and tested on 75 seizures collected over 1608 d utilizing a genetic algorithm to optimize forecasting hyper-parameters (prediction horizon (PH), median filter window length, and probability threshold) for each subject-specific seizure forecasting model. The trained CNN models were deployed on a hand-held tablet computer and tested on testing iEEG datasets from four canines. The results from the iEEG testing datasets were compared with Monte Carlo simulations using a Poisson random predictor with equal time in warning to evaluate seizure forecasting performance. The results show the CNN models forecasted seizures at rates significantly above chance in all four dogs (p   <  0.01, with mean 0.79 sensitivity and 18% time in warning). The deep learning method presented here surpassed the performance of previously reported methods using computationally expensive features with standard machine learning methods like logistic regression and support vector machine classifiers. Our findings principally support the feasibility of deploying trained CNN models on a hand-held computational device (Mayo Epilepsy Assist Device) that analyzes streaming iEEG data for real-time seizure forecasting.

Identifiants

pubmed: 30959492
doi: 10.1088/1741-2552/ab172d
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

036031

Auteurs

Petr Nejedly (P)

Mayo Systems Electrophysiology Laboratory, Department of Neurology, Mayo Clinic, Rochester, MN, United States of America. International Clinical Research Center, St. Anne's University Hospital, Brno, Czech Republic. The Czech Academy of Sciences, Institute of Scientific Instruments, Brno, Czech Republic.

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Classifications MeSH