Visbrain: A Multi-Purpose GPU-Accelerated Open-Source Suite for Multimodal Brain Data Visualization.
EEG
MEG
OpenGL
brain
neuroscience
open-source
python
visualization
Journal
Frontiers in neuroinformatics
ISSN: 1662-5196
Titre abrégé: Front Neuroinform
Pays: Switzerland
ID NLM: 101477957
Informations de publication
Date de publication:
2019
2019
Historique:
received:
27
09
2018
accepted:
19
02
2019
entrez:
11
4
2019
pubmed:
11
4
2019
medline:
11
4
2019
Statut:
epublish
Résumé
We present Visbrain, a Python open-source package that offers a comprehensive visualization suite for neuroimaging and electrophysiological brain data. Visbrain consists of two levels of abstraction: (1) objects which represent highly configurable neuro-oriented visual primitives (3D brain, sources connectivity, etc.) and (2) graphical user interfaces for higher level interactions. The object level offers flexible and modular tools to produce and automate the production of figures using an approach similar to that of Matplotlib with subplots. The second level visually connects these objects by controlling properties and interactions through graphical interfaces. The current release of Visbrain (version 0.4.2) contains 14 different objects and three responsive graphical user interfaces, built with PyQt:
Identifiants
pubmed: 30967769
doi: 10.3389/fninf.2019.00014
pmc: PMC6439346
doi:
Types de publication
Journal Article
Langues
eng
Pagination
14Références
Neuroimage. 2002 Jan;15(1):273-89
pubmed: 11771995
J Neurosci Methods. 2004 Mar 15;134(1):9-21
pubmed: 15102499
Comput Intell Neurosci. 2011;2011:156869
pubmed: 21253357
Comput Intell Neurosci. 2011;2011:879716
pubmed: 21584256
Magn Reson Imaging. 2012 Nov;30(9):1323-41
pubmed: 22770690
Front Neurosci. 2013 Dec 26;7:267
pubmed: 24431986
Front Neuroinform. 2014 Feb 21;8:14
pubmed: 24600388
Sci Data. 2016 Jun 21;3:160044
pubmed: 27326542
Neuroimage. 2017 Feb 15;147:473-487
pubmed: 27915117
Front Neuroinform. 2017 Sep 21;11:60
pubmed: 28983246
Sci Data. 2018 Jun 19;5:180110
pubmed: 29917016