Identification and description of the uncertainty, variability, bias and influence in quantitative structure-activity relationships (QSARs) for toxicity prediction.

Assessment criteria Barriers Bias Influence QSAR Toxicity prediction Uncertainty Variability

Journal

Regulatory toxicology and pharmacology : RTP
ISSN: 1096-0295
Titre abrégé: Regul Toxicol Pharmacol
Pays: Netherlands
ID NLM: 8214983

Informations de publication

Date de publication:
Aug 2019
Historique:
received: 17 09 2018
revised: 08 04 2019
accepted: 14 04 2019
pubmed: 27 4 2019
medline: 14 2 2020
entrez: 27 4 2019
Statut: ppublish

Résumé

Improving regulatory confidence in, and acceptance of, a prediction of toxicity from a quantitative structure-activity relationship (QSAR) requires assessment of its uncertainty and determination of whether the uncertainty is acceptable. Thus, it is crucial to identify potential uncertainties fundamental to QSAR predictions. Based on expert review, sources of uncertainties, variabilities and biases, as well as areas of influence in QSARs for toxicity prediction were established. These were grouped into three thematic areas: uncertainties, variabilities, potential biases and influences associated with 1) the creation of the QSAR, 2) the description of the QSAR, and 3) the application of the QSAR, also showing barriers for their use. Each thematic area was divided into a total of 13 main areas of concern with 49 assessment criteria covering all aspects of QSAR development, documentation and use. Two case studies were undertaken on different types of QSARs that demonstrated the applicability of the assessment criteria to identify potential weaknesses in the use of a QSAR for a specific purpose such that they may be addressed and mitigation strategies can be proposed, as well as enabling an informed decision on the adequacy of the model in the considered context.

Identifiants

pubmed: 31026540
pii: S0273-2300(19)30106-0
doi: 10.1016/j.yrtph.2019.04.007
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

90-104

Informations de copyright

Copyright © 2019 Elsevier Inc. All rights reserved.

Auteurs

Mark T D Cronin (MTD)

Liverpool John Moores University, School of Pharmacy and Biomolecular Sciences, Liverpool, England, United Kingdom. Electronic address: m.t.cronin@ljmu.ac.uk.

Andrea-Nicole Richarz (AN)

European Commission, Joint Research Centre (JRC), Ispra, Italy.

Terry W Schultz (TW)

(c)The University of Tennessee, College of Veterinary Medicine, Knoxville, TN, USA.

Articles similaires

Humans Hepatectomy Male Female Retrospective Studies
Humans Medical Futility Turkey Qualitative Research Terminal Care
Alzheimer Disease Humans Regression Analysis Quantitative Structure-Activity Relationship Drug Design
1.00
Humans Personality Judgment Choice Behavior Male

Classifications MeSH