The influence of spatial and temporal resolutions on the analysis of cell-cell interaction: a systematic study for time-lapse microscopy applications.
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
01 05 2019
01 05 2019
Historique:
received:
05
10
2018
accepted:
13
03
2019
entrez:
3
5
2019
pubmed:
3
5
2019
medline:
24
10
2020
Statut:
epublish
Résumé
Cell-cell interactions are an observable manifestation of underlying complex biological processes occurring in response to diversified biochemical stimuli. Recent experiments with microfluidic devices and live cell imaging show that it is possible to characterize cell kinematics via computerized algorithms and unravel the effects of targeted therapies. We study the influence of spatial and temporal resolutions of time-lapse videos on motility and interaction descriptors with computational models that mimic the interaction dynamics among cells. We show that the experimental set-up of time-lapse microscopy has a direct impact on the cell tracking algorithm and on the derived numerical descriptors. We also show that, when comparing kinematic descriptors in two diverse experimental conditions, too low resolutions may alter the descriptors' discriminative power, and so the statistical significance of the difference between the two compared distributions. The conclusions derived from the computational models were experimentally confirmed by a series of video-microscopy acquisitions of co-cultures of unlabelled human cancer and immune cells embedded in 3D collagen gels within microfluidic devices. We argue that the experimental protocol of acquisition should be adapted to the specific kind of analysis involved and to the chosen descriptors in order to derive reliable conclusions and avoid biasing the interpretation of results.
Identifiants
pubmed: 31043687
doi: 10.1038/s41598-019-42475-5
pii: 10.1038/s41598-019-42475-5
pmc: PMC6494897
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
6789Références
Sci Rep. 2015 Oct 20;5:15348
pubmed: 26481189
Curr Biol. 2015 Jan 19;25(2):242-250
pubmed: 25578904
Lab Chip. 2018 Jun 26;18(13):1844-1858
pubmed: 29796561
J R Soc Interface. 2012 Dec 7;9(77):3268-78
pubmed: 22832363
PLoS Comput Biol. 2013;9(3):e1002944
pubmed: 23505356
Nat Rev Immunol. 2009 Nov;9(11):789-98
pubmed: 19834485
Nature. 2015 Jul 16;523(7560):266
pubmed: 26178942
Analyst. 2014 Dec 21;139(24):6371-8
pubmed: 25118341
Sci Rep. 2017 Apr 24;7(1):1093
pubmed: 28439087
Lab Chip. 2013 Jan 21;13(2):229-39
pubmed: 23108434
Trends Cell Biol. 2016 Feb;26(2):88-110
pubmed: 26481052
Nature. 2014 Mar 13;507(7491):181-9
pubmed: 24622198
Cell Commun Signal. 2013 Apr 11;11(1):24
pubmed: 23578051
Phys Chem Chem Phys. 2014 May 7;16(17):7686-91
pubmed: 24651929
Science. 2015 Nov 20;350(6263):972-8
pubmed: 26516201
J Immunol Methods. 2009 Aug 15;347(1-2):54-69
pubmed: 19520083
Sci Rep. 2014 Oct 16;4:6639
pubmed: 25322144
PLoS Comput Biol. 2018 Jun 25;14(6):e1006235
pubmed: 29939995
Annu Rev Biophys Biomol Struct. 1997;26:373-99
pubmed: 9241424
BMC Cell Biol. 2010 Apr 08;11:24
pubmed: 20377897
Cytometry A. 2018 Mar;93(3):357-370
pubmed: 28976646
Sci Rep. 2017 Oct 6;7(1):12737
pubmed: 28986543
PLoS One. 2013;8(3):e58859
pubmed: 23527039
PLoS Biol. 2016 May 19;14(5):e1002463
pubmed: 27196433