Mechanism and chain specificity of RNF216/TRIAD3, the ubiquitin ligase mutated in Gordon Holmes syndrome.


Journal

Human molecular genetics
ISSN: 1460-2083
Titre abrégé: Hum Mol Genet
Pays: England
ID NLM: 9208958

Informations de publication

Date de publication:
01 09 2019
Historique:
received: 14 03 2019
revised: 26 04 2019
accepted: 07 05 2019
pubmed: 16 5 2019
medline: 10 3 2020
entrez: 16 5 2019
Statut: ppublish

Résumé

Gordon Holmes syndrome (GDHS) is an adult-onset neurodegenerative disorder characterized by ataxia and hypogonadotropic hypogonadism. GDHS is caused by mutations in the gene encoding the RING-between-RING (RBR)-type ubiquitin ligase RNF216, also known as TRIAD3. The molecular pathology of GDHS is not understood, although RNF216 has been reported to modify several substrates with K48-linked ubiquitin chains, thereby targeting them for proteasomal degradation. We identified RNF216 in a bioinformatical screen for putative SUMO-targeted ubiquitin ligases and confirmed that a cluster of predicted SUMO-interaction motifs (SIMs) indeed recognizes SUMO2 chains without targeting them for ubiquitination. Surprisingly, purified RNF216 turned out to be a highly active ubiquitin ligase that exclusively forms K63-linked ubiquitin chains, suggesting that the previously reported increase of K48-linked chains after RNF216 overexpression is an indirect effect. The linkage-determining region of RNF216 was mapped to a narrow window encompassing the last two Zn-fingers of the RBR triad, including a short C-terminal extension. Neither the SIMs nor a newly discovered ubiquitin-binding domain in the central portion of RNF216 contributes to chain specificity. Both missense mutations reported in GDHS patients completely abrogate the ubiquitin ligase activity. For the R660C mutation, ligase activity could be restored by using a chemical ubiquitin loading protocol that circumvents the requirement for ubiquitin-conjugating (E2) enzymes. This result suggests Arg-660 to be required for the ubiquitin transfer from the E2 to the catalytic cysteine. Our findings necessitate a re-evaluation of the previously assumed degradative role of RNF216 and rather argue for a non-degradative K63 ubiquitination, potentially acting on SUMOylated substrates.

Identifiants

pubmed: 31087003
pii: 5489154
doi: 10.1093/hmg/ddz098
doi:

Substances chimiques

Carrier Proteins 0
Small Ubiquitin-Related Modifier Proteins 0
Ubiquitin 0
Gonadotropin-Releasing Hormone 33515-09-2
RNF216 protein, human EC 2.3.2.27
Ubiquitin-Protein Ligases EC 2.3.2.27

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

2862-2873

Informations de copyright

© The Author(s) 2019. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Auteurs

Ramkumar Seenivasan (R)

Institute for Genetics, University of Cologne, Zülpicher Str. 47a, 50674 Cologne, Germany.

Thomas Hermanns (T)

Institute for Genetics, University of Cologne, Zülpicher Str. 47a, 50674 Cologne, Germany.

Tamara Blyszcz (T)

Institute for Genetics, University of Cologne, Zülpicher Str. 47a, 50674 Cologne, Germany.

Michael Lammers (M)

Institute for Genetics, University of Cologne, Zülpicher Str. 47a, 50674 Cologne, Germany.
Institute of Biochemistry, Synthetic and Structural Biochemistry, University of Greifswald, Felix-Hausdorff-Str. 4, 17487 Greifswald, Germany.

Gerrit J K Praefcke (GJK)

Institute for Genetics, University of Cologne, Zülpicher Str. 47a, 50674 Cologne, Germany.
Division of Haematology and Transfusion Medicine, Paul-Ehrlich-Institut, Paul-Ehrlich-Straße 51-59, 63225 Langen, Germany.

Kay Hofmann (K)

Institute for Genetics, University of Cologne, Zülpicher Str. 47a, 50674 Cologne, Germany.

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Classifications MeSH