Experimental 3D coherent diffractive imaging from photon-sparse random projections.
X-ray free-electron lasers
XFELs
coherent X-ray diffractive imaging (CXDI)
phase problem
single particles
Journal
IUCrJ
ISSN: 2052-2525
Titre abrégé: IUCrJ
Pays: England
ID NLM: 101623101
Informations de publication
Date de publication:
01 May 2019
01 May 2019
Historique:
received:
09
11
2018
accepted:
24
02
2019
entrez:
18
5
2019
pubmed:
18
5
2019
medline:
18
5
2019
Statut:
epublish
Résumé
The routine atomic resolution structure determination of single particles is expected to have profound implications for probing structure-function relationships in systems ranging from energy-storage materials to biological molecules. Extremely bright ultrashort-pulse X-ray sources - X-ray free-electron lasers (XFELs) - provide X-rays that can be used to probe ensembles of nearly identical nanoscale particles. When combined with coherent diffractive imaging, these objects can be imaged; however, as the resolution of the images approaches the atomic scale, the measured data are increasingly difficult to obtain and, during an X-ray pulse, the number of photons incident on the 2D detector is much smaller than the number of pixels. This latter concern, the signal 'sparsity', materially impedes the application of the method. An experimental analog using a conventional X-ray source is demonstrated and yields signal levels comparable with those expected from single biomolecules illuminated by focused XFEL pulses. The analog experiment provides an invaluable cross check on the fidelity of the reconstructed data that is not available during XFEL experiments. Using these experimental data, it is established that a sparsity of order 1.3 × 10
Identifiants
pubmed: 31098017
doi: 10.1107/S2052252519002781
pii: it5020
pmc: PMC6503918
doi:
Types de publication
Journal Article
Langues
eng
Pagination
357-365Références
J Appl Crystallogr. 2017 Jun 14;50(Pt 4):985-993
pubmed: 28808431
Phys Rev Lett. 2015 Mar 6;114(9):098102
pubmed: 25793853
IUCrJ. 2018 Sep 18;5(Pt 6):727-736
pubmed: 30443357
Opt Express. 2014 Feb 10;22(3):2403-13
pubmed: 24663531
Opt Express. 2012 Jun 4;20(12):13129-37
pubmed: 22714341
Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):7222-7227
pubmed: 28652365
Philos Trans R Soc Lond B Biol Sci. 2014 Jul 17;369(1647):20130328
pubmed: 24914155
Nat Commun. 2018 Jun 18;9(1):2375
pubmed: 29915244
J Struct Biol. 2012 Jul;179(1):41-5
pubmed: 22575364
IUCrJ. 2015 Feb 03;2(Pt 2):246-55
pubmed: 25866661
J Struct Biol. 2003 Oct-Nov;144(1-2):219-27
pubmed: 14643224
J Synchrotron Radiat. 2017 Jul 1;24(Pt 4):727-737
pubmed: 28664878
Acta Crystallogr A. 2011 Nov;67(Pt 6):533-43
pubmed: 22011469
Rev Sci Instrum. 2007 Jan;78(1):011301
pubmed: 17503899
Nat Methods. 2012 Sep;9(9):854-5
pubmed: 22936162
Phys Rev Lett. 2010 Jun 4;104(22):225501
pubmed: 20867179
Opt Express. 2012 Jun 4;20(12):12799-826
pubmed: 22714309
Acta Crystallogr A Found Adv. 2014 Jul;70(Pt 4):364-72
pubmed: 25970194
Opt Lett. 2008 Jan 15;33(2):156-8
pubmed: 18197224
Struct Dyn. 2015 Apr 21;2(4):041701
pubmed: 26798801
J Struct Biol. 2005 Sep;151(3):250-62
pubmed: 16125414
Curr Opin Struct Biol. 2016 Oct;40:186-194
pubmed: 27978962
Sci Data. 2016 Aug 01;3:160064
pubmed: 27478984
J Opt Soc Am A Opt Image Sci Vis. 2006 May;23(5):1179-200
pubmed: 16642197
J Synchrotron Radiat. 2014 May;21(Pt 3):594-9
pubmed: 24763650
IUCrJ. 2016 Jan 01;3(Pt 1):43-50
pubmed: 26870380
Nature. 2011 Feb 3;470(7332):73-7
pubmed: 21293373
J Synchrotron Radiat. 2018 Jul 1;25(Pt 4):1010-1021
pubmed: 29979162
IUCrJ. 2018 Jul 20;5(Pt 5):548-558
pubmed: 30224958
Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10286-91
pubmed: 26240348
Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Aug;80(2 Pt 2):026705
pubmed: 19792279
IUCrJ. 2018 Sep 01;5(Pt 5):531-541
pubmed: 30224956
IUCrJ. 2017 May 10;4(Pt 4):322-339
pubmed: 28875020
Adv Mater. 2014 Dec 10;26(46):7747-63
pubmed: 24955950
Sci Data. 2017 Jun 27;4:170079
pubmed: 28654088
Nature. 2000 Aug 17;406(6797):752-7
pubmed: 10963603
J Appl Crystallogr. 2016 Jun 20;49(Pt 4):1320-1335
pubmed: 27504078
IUCrJ. 2017 Apr 07;4(Pt 3):251-262
pubmed: 28512572
Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Oct;88(4):042710
pubmed: 24229216
IUCrJ. 2017 Sep 01;4(Pt 5):560-568
pubmed: 28989713
Phys Rev E. 2016 May;93(5):053302
pubmed: 27301000