Bacterial communities associated with tail fan necrosis in spiny lobster, Jasus edwardsii.
Illumina sequencing
bacteria
bacterial communities
marine lobsters
shell disease
Journal
FEMS microbiology ecology
ISSN: 1574-6941
Titre abrégé: FEMS Microbiol Ecol
Pays: England
ID NLM: 8901229
Informations de publication
Date de publication:
01 06 2019
01 06 2019
Historique:
received:
17
12
2018
accepted:
17
05
2019
pubmed:
21
5
2019
medline:
27
5
2020
entrez:
21
5
2019
Statut:
ppublish
Résumé
Spiny lobsters are among the most valuable seafood products, but their commercial value is greatly diminished by tail fan necrosis (TFN), an unsightly blackening and erosion of the posterior margins on the abdomen. The condition results from bacterial incursion following physical damage to the cuticle. In this current study, the bacterial communities on the cuticle of tail fans of wild spiny lobsters with and without TFN were examined using 16S rDNA Illumina sequencing to identify whether there is a group of bacteria associated with TFN. The bacterial communities in the affected cuticle had significantly less richness, diversity and evenness, but greater variability between samples than those in unaffected cuticle. There were 21 phylotypes closely associated with TFN, of which, those belonging to Aquimarina, Flavobacterium, Neptunomonas, Streptomyces, Flavobacteriaceae and Thiohalorhabdales were most important. The affected cuticle samples were clustered into two microbial colonization states, each characterized by distinct phylotypes that are closely associated with TFN, suggesting different phylotypes were associated with different microbial colonization states of TFN. These bacteria appear to develop their association through opportunistic pathways created by the provision of changes in the bacterial habitat associated with injury to the cuticle or compromised immunity subsequent to the injury.
Identifiants
pubmed: 31107952
pii: 5492258
doi: 10.1093/femsec/fiz070
pii:
doi:
Substances chimiques
DNA, Bacterial
0
DNA, Ribosomal
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Informations de copyright
© FEMS 2019.