Induced androgenetic development in rainbow trout and transcriptome analysis of irradiated eggs.
Animals
Aquaculture
/ methods
Cell Nucleus
/ genetics
Female
Gene Expression Profiling
Gene Expression Regulation, Developmental
/ radiation effects
Genes, Immediate-Early
/ radiation effects
Haploidy
Male
Oncorhynchus mykiss
/ genetics
Ovum
/ cytology
Paternal Inheritance
/ radiation effects
RNA Stability
/ radiation effects
RNA, Messenger, Stored
/ metabolism
Radiation, Ionizing
Transcriptome
/ radiation effects
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
30 05 2019
30 05 2019
Historique:
received:
13
08
2018
accepted:
20
05
2019
entrez:
1
6
2019
pubmed:
31
5
2019
medline:
24
10
2020
Statut:
epublish
Résumé
Ionizing radiation is administered to damage nuclear genome in fish eggs during induced androgenesis. In this study, we examined whether 350 Gy of X-ray applied to damage chromosomes in the rainbow trout eggs affects maternal RNA. Shortly after irradiation, we did not find any symptoms of RNA degradation in the treated eggs. Significant (p < 0.01) differences between non-irradiated and irradiated eggs concerned only a few transcripts including increased expression of immediate early response 2 (IER2) and early growth response 1 (EGR1) genes observed in the irradiated eggs. Both genes belong to the group of "immediate early genes" that respond quickly to the diverse extracellular stimuli. Elevated expression of these genes was accompanied by decreased level of ssa-miR-10b-5p and ssa-miR-21b-5p (p < 0.05), for which IER2 and EGR1 are target genes. The level of RNA in the fertilized irradiated eggs was highly significantly lower than in the non-irradiated eggs (p < 0.001) and in the unfertilized irradiated eggs (p < 0.0001). However, transcriptome profiles of fertilized non-irradiated eggs and fertilized irradiated eggs did not differ significantly. Thus, we assume that reduced abundance of mRNA in the fertilized irradiated eggs was associated with post-translational degradation and clearance of the maternal transcripts rather than from the irradiation of eggs.
Identifiants
pubmed: 31147623
doi: 10.1038/s41598-019-44568-7
pii: 10.1038/s41598-019-44568-7
pmc: PMC6542805
doi:
Substances chimiques
RNA, Messenger, Stored
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
8084Références
J Chem Neuroanat. 2016 Nov;77:24-29
pubmed: 27134039
J Hered. 1985 May-Jun;76(3):177-81
pubmed: 3998440
Eur J Biochem. 2002 Jan;269(1):337-46
pubmed: 11784328
Cancer Res. 2006 Jan 15;66(2):1052-61
pubmed: 16424041
Biology (Basel). 2012 Dec 14;1(3):895-905
pubmed: 24832523
J Hered. 1996 Jan-Feb;87(1):77-80
pubmed: 8742822
Genome Biol. 2010;11(10):R106
pubmed: 20979621
Curr Top Dev Biol. 2015;113:191-232
pubmed: 26358874
PLoS Genet. 2005 Aug;1(2):260-76
pubmed: 16132083
Nucleic Acids Res. 2015 Jul 1;43(W1):W460-6
pubmed: 25977294
Reprod Domest Anim. 2014 Apr;49(2):191-6
pubmed: 24219413
Bioinformatics. 2012 Aug 1;28(15):2059-61
pubmed: 22628521
Dev Biol. 2007 Feb 1;302(1):104-17
pubmed: 17022963
Reprod Domest Anim. 2015 Apr;50(2):256-262
pubmed: 25601334
Radiat Res. 1995 Sep;143(3):263-72
pubmed: 7652163
J Radiat Res. 2013 Sep;54(5):808-22
pubmed: 23447695
Genome Biol. 2014;15(12):550
pubmed: 25516281
J Appl Genet. 2010;51(3):309-17
pubmed: 20720305
Nucleic Acids Res. 2008 Jun;36(10):3420-35
pubmed: 18445632
Nucleic Acids Res. 2011 Jan;39(1):257-68
pubmed: 20739353
Science. 2009 Oct 16;326(5951):430-3
pubmed: 19833967
Int J Oncol. 2009 Jun;34(6):1661-8
pubmed: 19424585
Nucleic Acids Res. 2008 Jan;36(Database issue):D154-8
pubmed: 17991681
J Fish Dis. 2012 Jun;35(6):447-54
pubmed: 22524565
PLoS One. 2012;7(6):e39649
pubmed: 22761856
BMC Genomics. 2016 Aug 08;17:566
pubmed: 27502506
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
Genome Res. 2011 Aug;21(8):1328-38
pubmed: 21555364
Mol Oncol. 2011 Aug;5(4):336-48
pubmed: 21795128
Nucleic Acids Res. 2001 May 1;29(9):e45
pubmed: 11328886
Dev Cell. 2007 Jan;12(1):143-55
pubmed: 17199047
BMC Genomics. 2012 Jan 10;13:11
pubmed: 22233483
Development. 2018 Jan 8;145(1):
pubmed: 29229769
Science. 2006 Apr 7;312(5770):75-9
pubmed: 16484454
Radiat Oncol. 2010 Mar 26;5:25
pubmed: 20346162
Nature. 2004 Sep 16;431(7006):350-5
pubmed: 15372042
Reprod Biol. 2013 Jun;13(2):105-12
pubmed: 23719114
Brief Funct Genomics. 2014 Mar;13(2):95-105
pubmed: 24335756
Folia Biol (Krakow). 2002;50(1-2):13-6
pubmed: 12597527
Genome Biol. 2011;12(3):R22
pubmed: 21410973
BMC Bioinformatics. 2016 Mar 31;17:148
pubmed: 27036505
Development. 1993 Oct;119(2):447-56
pubmed: 8287796
Theriogenology. 2016 Sep 1;86(4):1054-1060.e1
pubmed: 27125692
Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
pubmed: 16381832
Nucleic Acids Res. 2018 May 18;46(9):4607-4621
pubmed: 29660001
Nat Methods. 2013 Jan;10(1):71-3
pubmed: 23160280
Gene Expr Patterns. 2009 Apr;9(4):209-14
pubmed: 19154798
Theriogenology. 2002 Mar 1;57(4):1229-49
pubmed: 12013444
EMBO J. 2014 Aug 18;33(16):1751-66
pubmed: 24957527
Curr Biol. 2006 Nov 7;16(21):2135-42
pubmed: 17084698