Molecular characterization of peste-des-petits ruminants virus from Nepal, 2005 to 2016.

Lineage IV Molecular epidemiology Nepal peste-des-petits ruminants

Journal

Virusdisease
ISSN: 2347-3584
Titre abrégé: Virusdisease
Pays: India
ID NLM: 101624144

Informations de publication

Date de publication:
Jun 2019
Historique:
received: 26 09 2018
accepted: 14 12 2018
entrez: 11 6 2019
pubmed: 11 6 2019
medline: 11 6 2019
Statut: ppublish

Résumé

Outbreaks of peste-des-petits ruminants (PPR) has been reported regularly in Nepal since 1994. Despite this, there has been limited molecular characterization of circulating virus in the country. In this study a 351 bp segment of the nucleoprotein gene of the PPR virus (PPRV) was amplified and sequenced from ten samples collected between 2005 and 2016. Phylogenetic trees were estimated from these sequences using the maximum likelihood method confirming that all of the PPRV from the samples analysed belonged to the sub-clade IV of clade I of lineage IV and that they shared a common origin with other PPRV isolates in the region.

Identifiants

DOI: 10.1007/s13337-018-0504-y PMID: 31179373 PMC: PMC6531496
pubmed: 31179373
doi: 10.1007/s13337-018-0504-y
pii: 504
pmc: PMC6531496
doi:

Types de publication

Journal Article

Langues

eng

Pagination

315-318

Déclaration de conflit d'intérêts

Conflict of interestThe authors declare that they have no conflict of interests regarding the publication of this study.

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Auteurs

Samjhana Kafle Pandey (SK)

Central Veterinary Laboratory, Kathmandu, Nepal.

Pragya Koirala (P)

Central Veterinary Laboratory, Kathmandu, Nepal.

Manju Maharjan (M)

Central Veterinary Laboratory, Kathmandu, Nepal.

Charles Euloge Lamien (CE)

2Animal Production and Health Laboratory Joint, FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Wagramer Strasse 5, P.O. Box 100, 1400 Vienna, Austria.

Giovanni Cattoli (G)

2Animal Production and Health Laboratory Joint, FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Wagramer Strasse 5, P.O. Box 100, 1400 Vienna, Austria.

William G Dundon (WG)

2Animal Production and Health Laboratory Joint, FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Wagramer Strasse 5, P.O. Box 100, 1400 Vienna, Austria.
APHL Joint FAO/IAEA Division, IAEA Laboratories, 2444 Seibersdorf, Austria.
ORCID: 0000-0002-2776-169X

Tirumala B K Settypalli (TBK)

2Animal Production and Health Laboratory Joint, FAO/IAEA Division of Nuclear Techniques in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Wagramer Strasse 5, P.O. Box 100, 1400 Vienna, Austria.

Classifications MeSH