Centralized scientific communities are less likely to generate replicable results.
collaboration networks
computational biology
computational social science
meta-research
none
replication
robust knowledge
sociology of science
systems biology
Journal
eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614
Informations de publication
Date de publication:
02 07 2019
02 07 2019
Historique:
received:
25
10
2018
accepted:
08
05
2019
entrez:
3
7
2019
pubmed:
3
7
2019
medline:
26
2
2020
Statut:
epublish
Résumé
Concerns have been expressed about the robustness of experimental findings in several areas of science, but these matters have not been evaluated at scale. Here we identify a large sample of published drug-gene interaction claims curated in the Comparative Toxicogenomics Database (for example, benzo(a)pyrene decreases expression of SLC22A3) and evaluate these claims by connecting them with high-throughput experiments from the LINCS L1000 program. Our sample included 60,159 supporting findings and 4253 opposing findings about 51,292 drug-gene interaction claims in 3363 scientific articles. We show that claims reported in a single paper replicate 19.0% (95% confidence interval [CI], 16.9-21.2%) more frequently than expected, while claims reported in multiple papers replicate 45.5% (95% CI, 21.8-74.2%) more frequently than expected. We also analyze the subsample of interactions with two or more published findings (2493 claims; 6272 supporting findings; 339 opposing findings; 1282 research articles), and show that centralized scientific communities, which use similar methods and involve shared authors who contribute to many articles, propagate less replicable claims than decentralized communities, which use more diverse methods and contain more independent teams. Our findings suggest how policies that foster decentralized collaboration will increase the robustness of scientific findings in biomedical research.
Identifiants
pubmed: 31264964
doi: 10.7554/eLife.43094
pii: 43094
pmc: PMC6606034
doi:
pii:
Banques de données
GEO
['GSE70138']
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Defense Advanced Research Projects Agency
ID : Big Mechanism 14145043
Pays : International
Organisme : National Science Foundation
ID : SciSIP 1158803
Pays : International
Organisme : Air Force Office of Scientific Research
ID : FA9550-15-1-0162
Pays : International
Informations de copyright
© 2019, Danchev et al.
Déclaration de conflit d'intérêts
VD, AR, JE No competing interests declared
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