The rich conformational landscape of perillyl alcohol revealed by broadband rotational spectroscopy and theoretical modelling.


Journal

Physical chemistry chemical physics : PCCP
ISSN: 1463-9084
Titre abrégé: Phys Chem Chem Phys
Pays: England
ID NLM: 100888160

Informations de publication

Date de publication:
17 Jul 2019
Historique:
pubmed: 10 7 2019
medline: 10 7 2019
entrez: 10 7 2019
Statut: ppublish

Résumé

The rotational spectrum of perillyl alcohol, a naturally occurring, chiral, dietary monoterpene, was investigated using a chirped pulse Fourier transform microwave spectrometer and a cavity-based Fourier transform microwave spectrometer. To aid the assignment of the dense chirped pulse spectrum obtained, extensive theoretical conformational searches were carried out. In one approach, several one and two-dimensional scans along three dihedral angles associated with the rotational motions of the -OH, -CH2OH, and -C(CH2)CH3 groups were performed. These scans, combined with the equatorial and axial positions of the -C(CH2)CH3 group, resulted in 54 conformers. The same conformers were identified in the second approach where a semi-classical conformational search code was used. The relative stabilities of the conformers and the interconversion barriers among them were explored extensively at the DFT B3LYP-D3(BJ)/def2-TZVP and B3LYP-D3(BJ)/6-311++G(2d,p), as well as local MP2/aug-cc-pVQZ levels of theory, and 12 conformers were ultimately identified as possibly observable candidates in a molecular jet expansion. Rotational spectra of eight out of the 12 candidates were observed experimentally and analyzed. The non-observation of the remaining four conformers may be attributed to their low abundances. The study points out the importance of identifying all conformers of relevant abundance, even those which could not be detected experimentally, in order to properly benchmark the theoretical relative stabilities with the experimental ones. A comprehensive study of the conformational distribution of perillyl alcohol contributes to our understanding of its structural properties which may influence its functions.

Identifiants

pubmed: 31287115
doi: 10.1039/c9cp03028j
doi:

Types de publication

Journal Article

Langues

eng

Pagination

15408-15416

Auteurs

Fan Xie (F)

Chemistry Department, The University of Alberta, Edmonton, Alberta, CanadaT6G 2G2. yunjie.xu@ualberta.ca.

Nathan A Seifert (NA)

Chemistry Department, The University of Alberta, Edmonton, Alberta, CanadaT6G 2G2. yunjie.xu@ualberta.ca.

Matthias Heger (M)

Chemistry Department, The University of Alberta, Edmonton, Alberta, CanadaT6G 2G2. yunjie.xu@ualberta.ca.

Javix Thomas (J)

Chemistry Department, The University of Alberta, Edmonton, Alberta, CanadaT6G 2G2. yunjie.xu@ualberta.ca.

Wolfgang Jäger (W)

Chemistry Department, The University of Alberta, Edmonton, Alberta, CanadaT6G 2G2. yunjie.xu@ualberta.ca.

Yunjie Xu (Y)

Chemistry Department, The University of Alberta, Edmonton, Alberta, CanadaT6G 2G2. yunjie.xu@ualberta.ca.

Classifications MeSH