Identification of ryuvidine as a KDM5A inhibitor.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
09 07 2019
Historique:
received: 23 04 2019
accepted: 26 06 2019
entrez: 11 7 2019
pubmed: 11 7 2019
medline: 4 11 2020
Statut: epublish

Résumé

KDM5 family members (A, B, C and D) that demethylate H3K4me3 have been shown to be involved in human cancers. Here we performed screening for KDM5A inhibitors from chemical libraries using the AlphaScreen method and identified a battery of screening hits that inhibited recombinant KDM5A. These compounds were further subjected to cell-based screening using a reporter gene that responded to KDM5A inhibition and 6 compounds were obtained as candidate inhibitors. When further confirmation of their inhibition activity on cellular KDM5A was made by immunostaining H3K4me3 in KDM5A-overexpressing cells, ryuvidine clearly repressed H3K4me3 demethylation. Ryuvidine prevented generation of gefitinib-tolerant human small-cell lung cancer PC9 cells and also inhibited the growth of the drug-tolerant cells at concentrations that did not affect the growth of parental PC9 cells. Ryuvidine inhibited not only KDM5A but also recombinant KDM5B and C; KDM5B was the most sensitive to the inhibitor. These results warrant that ryuvidine may serve as a lead compound for KDM5 targeted therapeutics.

Identifiants

pubmed: 31289306
doi: 10.1038/s41598-019-46346-x
pii: 10.1038/s41598-019-46346-x
pmc: PMC6616564
doi:

Substances chimiques

Antineoplastic Agents 0
Enzyme Inhibitors 0
Small Molecule Libraries 0
KDM5A protein, human EC 1.14.11.-
Retinoblastoma-Binding Protein 2 EC 1.14.11.27

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

9952

Références

Trends Cancer. 2017 Oct;3(10):713-725
pubmed: 28958389
PLoS One. 2014 Jun 05;9(6):e98891
pubmed: 24902048
Bioorg Med Chem Lett. 2000 Mar 6;10(5):461-4
pubmed: 10743948
Bioorg Med Chem. 2011 Jun 15;19(12):3702-8
pubmed: 21227703
Bioorg Med Chem Lett. 2016 Feb 15;26(4):1193-5
pubmed: 26794039
Nat Rev Genet. 2007 Nov;8(11):829-33
pubmed: 17909537
Genes Dev. 2001 Sep 15;15(18):2343-60
pubmed: 11562345
Nature. 2000 Jan 6;403(6765):41-5
pubmed: 10638745
Cell Cycle. 2015;14(21):3418-29
pubmed: 26566863
Cell Rep. 2014 Mar 13;6(5):868-77
pubmed: 24582965
J Am Chem Soc. 2009 Dec 9;131(48):17536-7
pubmed: 19950987
Biochem Biophys Res Commun. 2015 Aug 21;464(2):659-66
pubmed: 26182878
Mol Cancer. 2014 Apr 09;13:81
pubmed: 24716659
Sci Rep. 2015 Aug 13;5:13076
pubmed: 26268703
PLoS One. 2013 Jul 29;8(7):e69784
pubmed: 23922798
Gastroenterology. 2010 Mar;138(3):981-92
pubmed: 19850045
Nat Chem Biol. 2016 Jul;12(7):539-45
pubmed: 27214403
Oncogenesis. 2013 Mar 25;2:e39
pubmed: 23552882
Cancer Res. 2007 Aug 15;67(16):7807-14
pubmed: 17699786
Cancer Cell. 2013 Jun 10;23(6):811-25
pubmed: 23764003
Sci Rep. 2017 Mar 23;7:44876
pubmed: 28332632
Cell. 2010 Apr 2;141(1):69-80
pubmed: 20371346
ACS Med Chem Lett. 2015 Apr 23;6(6):665-70
pubmed: 26101571
Biochim Biophys Acta. 2009 Jan;1789(1):58-68
pubmed: 18722564
J Biol Chem. 2013 Mar 29;288(13):9408-17
pubmed: 23408432
Cell Chem Biol. 2017 Mar 16;24(3):371-380
pubmed: 28262558
J Proteome Res. 2015 Sep 4;14(9):3492-502
pubmed: 26215926
J Biol Chem. 1999 May 28;274(22):15633-45
pubmed: 10336460
Cancer Res. 2013 Aug 1;73(15):4711-21
pubmed: 23722541
PLoS One. 2015 May 07;10(5):e0125343
pubmed: 25951238
Am J Transl Res. 2012;4(3):247-56
pubmed: 22937203
Proc Natl Acad Sci U S A. 2016 May 31;113(22):6259-64
pubmed: 27185910
Nat Commun. 2016 Feb 19;7:10690
pubmed: 26891683
Tumour Biol. 2015 Apr;36(4):2465-72
pubmed: 25663457
Nat Chem Biol. 2016 Jul;12(7):531-8
pubmed: 27214401
Epigenomics. 2014 Jun;6(3):277-86
pubmed: 25111482
Eur J Med Chem. 2018 Feb 25;146:636-650
pubmed: 29407987
Proc Natl Acad Sci U S A. 2007 Dec 4;104(49):19226-31
pubmed: 18048344
Int J Oncol. 2013 Apr;42(4):1212-8
pubmed: 23354547
Proc Natl Acad Sci U S A. 2011 Aug 16;108(33):13379-86
pubmed: 21788502
ACS Chem Biol. 2014 Nov 21;9(11):2471-8
pubmed: 25137013
Cell. 2010 May 14;141(4):583-94
pubmed: 20478252
Mol Cell. 2007 Mar 23;25(6):801-12
pubmed: 17363312
Bioorg Med Chem. 2018 Jul 15;26(11):2984-2991
pubmed: 29764755
Oncogene. 2012 Feb 9;31(6):776-86
pubmed: 21725364
Arch Biochem Biophys. 1996 Nov 1;335(1):82-92
pubmed: 8914837
Leuk Res. 2018 Feb;65:20-24
pubmed: 29253671
BMC Cancer. 2016 Feb 25;16:160
pubmed: 26917489
PLoS One. 2014 Jan 28;9(1):e86459
pubmed: 24489728
Mol Cancer. 2010 Mar 13;9:59
pubmed: 20226085
PLoS Med. 2005 Mar;2(3):e73
pubmed: 15737014
Cell. 2007 Nov 16;131(4):633-6
pubmed: 18022353
J Clin Invest. 2015 Dec;125(12):4625-37
pubmed: 26551685
Oncotarget. 2016 Jun 28;7(26):39931-39944
pubmed: 27224921
Cancer Cell. 2014 Jun 16;25(6):762-77
pubmed: 24937458
Nature. 2007 May 24;447(7143):407-12
pubmed: 17522673
Nature. 2009 Jun 11;459(7248):847-51
pubmed: 19430464
Int J Oncol. 2011 May;38(5):1267-77
pubmed: 21369698
Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3752-7
pubmed: 20133580
J Clin Oncol. 2005 Apr 10;23(11):2556-68
pubmed: 15767641
Biosci Biotechnol Biochem. 2014;78(6):1010-7
pubmed: 25036127

Auteurs

Eishin Mitsui (E)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.

Shogo Yoshida (S)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.

Yui Shinoda (Y)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.

Yasumasa Matsumori (Y)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.

Hiroshi Tsujii (H)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.

Mie Tsuchida (M)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.

Shuichi Wada (S)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.

Makoto Hasegawa (M)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.

Akihiro Ito (A)

Sch. of Life Sci., Tokyo Univ. of Pharm. & Life Sci., 1432-1 Horinouchi, Hachioji, Tokyo, 192-0392, Japan.
Chem. Genomics, RIKEN CSRS, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.

Koshiki Mino (K)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.
Drug Discov. Seed Cpds. Explorat. Unit, RIKEN CSRS, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.

Tetsuo Onuki (T)

Drug Discov. Seed Cpds. Explorat. Unit, RIKEN CSRS, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.

Minoru Yoshida (M)

Chem. Genomics, RIKEN CSRS, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
Drug Discov. Seed Cpds. Explorat. Unit, RIKEN CSRS, 2-1 Hirosawa, Wako, Saitama, 351-0198, Japan.
Department of Biotechnol., The Univ. of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan.

Ryuzo Sasaki (R)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan.
Frontier Pharma Inc., 1281-8 Tamura, Nagahama, Shiga, 526-0829, Japan.

Tamio Mizukami (T)

Nagahama Inst. Bio-Sci. & Tech., 1266 Tamura, Nagahama, Shiga, 526-0829, Japan. mizukami@nagahama-i-bio.ac.jp.
Frontier Pharma Inc., 1281-8 Tamura, Nagahama, Shiga, 526-0829, Japan. mizukami@nagahama-i-bio.ac.jp.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH