Chromosome-Level Alpaca Reference Genome
Dovetail Chicago
MHC
Minute Chromosome Syndrome
VicPac3.1
alpaca
chromosome-level
high-altitude adaptations
reference genome
Journal
Frontiers in genetics
ISSN: 1664-8021
Titre abrégé: Front Genet
Pays: Switzerland
ID NLM: 101560621
Informations de publication
Date de publication:
2019
2019
Historique:
received:
30
01
2019
accepted:
04
06
2019
entrez:
12
7
2019
pubmed:
12
7
2019
medline:
12
7
2019
Statut:
epublish
Résumé
The development of high-quality chromosomally assigned reference genomes constitutes a key feature for understanding genome architecture of a species and is critical for the discovery of the genetic blueprints of traits of biological significance. South American camelids serve people in extreme environments and are important fiber and companion animals worldwide. Despite this, the alpaca reference genome lags far behind those available for other domestic species. Here we produced a chromosome-level improved reference assembly for the alpaca genome using the DNA of the same female Huacaya alpaca as in previous assemblies. We generated 190X Illumina short-read, 8X Pacific Biosciences long-read and 60X Dovetail Chicago
Identifiants
pubmed: 31293619
doi: 10.3389/fgene.2019.00586
pmc: PMC6598621
doi:
Types de publication
Journal Article
Langues
eng
Pagination
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