Example dataset for the hMRI toolbox.

Analysis tools Quantitative MRI hMRI hMRI toolbox qMRI qMRI software

Journal

Data in brief
ISSN: 2352-3409
Titre abrégé: Data Brief
Pays: Netherlands
ID NLM: 101654995

Informations de publication

Date de publication:
Aug 2019
Historique:
received: 14 01 2019
revised: 09 05 2019
accepted: 03 06 2019
entrez: 13 7 2019
pubmed: 13 7 2019
medline: 13 7 2019
Statut: epublish

Résumé

The hMRI toolbox is an open-source toolbox for the calculation of quantitative MRI parameter maps from a series of weighted imaging data, and optionally additional calibration data. The multi-parameter mapping (MPM) protocol, incorporating calibration data to correct for spatial variation in the scanner's transmit and receive fields, is the most complete protocol that can be handled by the toolbox. Here we present a dataset acquired with such a full MPM protocol, which is made freely available to be used as a tutorial by following instructions provided on the associated toolbox wiki pages, which can be found at http://hMRI.info, and following the theory described in: hMRI - A toolbox for quantitative MRI in neuroscience and clinical research [1].

Identifiants

pubmed: 31297422
doi: 10.1016/j.dib.2019.104132
pii: S2352-3409(19)30486-X
pii: 104132
pmc: PMC6598837
doi:

Types de publication

Journal Article

Langues

eng

Pagination

104132

Subventions

Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : European Research Council
ID : 616905
Pays : International
Organisme : Medical Research Council
ID : MR/R000050/1
Pays : United Kingdom

Références

Magn Reson Med. 2002 Jun;47(6):1202-10
pubmed: 12111967
Magn Reson Med. 2009 Jan;61(1):125-35
pubmed: 19097220
Magn Reson Med. 2010 Jul;64(1):229-38
pubmed: 20572153
PLoS One. 2012;7(3):e32379
pubmed: 22427831
Magn Reson Med. 2016 Nov;76(5):1478-1485
pubmed: 26608936
Neuroimage. 2019 Jul 1;194:191-210
pubmed: 30677501

Auteurs

Martina F Callaghan (MF)

Wellcome Centre for Human Neuroimaging, London, UK.

Antoine Lutti (A)

Laboratory for Research in Neuroimaging, Department of Clinical Neuroscience, Lausanne University Hospital and University of Lausanne, Switzerland.

John Ashburner (J)

Wellcome Centre for Human Neuroimaging, London, UK.

Evelyne Balteau (E)

GIGA Institute, University of Liège, Liège, Belgium.

Nadège Corbin (N)

Wellcome Centre for Human Neuroimaging, London, UK.

Bogdan Draganski (B)

Laboratory for Research in Neuroimaging, Department of Clinical Neuroscience, Lausanne University Hospital and University of Lausanne, Switzerland.
Department of Neurology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.

Gunther Helms (G)

Medical Radiation Physics, Department of Clinical Sciences Lund, Lund University, Lund, Sweden.

Ferath Kherif (F)

Laboratory for Research in Neuroimaging, Department of Clinical Neuroscience, Lausanne University Hospital and University of Lausanne, Switzerland.

Tobias Leutritz (T)

Department of Neurophysics, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.

Siawoosh Mohammadi (S)

Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Christophe Phillips (C)

GIGA Institute, University of Liège, Liège, Belgium.

Enrico Reimer (E)

Department of Neurophysics, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.

Lars Ruthotto (L)

Emory University, Atlanta, USA.

Maryam Seif (M)

Spinal Cord Injury Centre, University Hospital Balgrist, University of Zurich, Zurich Switzerland.

Karsten Tabelow (K)

WIAS Berlin, Germany.

Gabriel Ziegler (G)

Institute for Cognitive Neurology and Dementia Research, University of Magdeburg, Germany.

Nikolaus Weiskopf (N)

Wellcome Centre for Human Neuroimaging, London, UK.
Department of Neurophysics, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.

Classifications MeSH