Patient-based prediction algorithm of relapse after allo-HSCT for acute Leukemia and its usefulness in the decision-making process using a machine learning approach.


Journal

Cancer medicine
ISSN: 2045-7634
Titre abrégé: Cancer Med
Pays: United States
ID NLM: 101595310

Informations de publication

Date de publication:
Sep 2019
Historique:
received: 16 03 2019
revised: 23 06 2019
accepted: 24 06 2019
pubmed: 16 7 2019
medline: 4 9 2020
entrez: 16 7 2019
Statut: ppublish

Résumé

Although allogeneic hematopoietic stem cell transplantation (allo-HSCT) is a curative therapy for high-risk acute leukemia (AL), some patients still relapse. Since patients simultaneously have many prognostic factors, difficulties are associated with the construction of a patient-based prediction algorithm of relapse. The alternating decision tree (ADTree) is a successful classification method that combines decision trees with the predictive accuracy of boosting. It is a component of machine learning (ML) and has the capacity to simultaneously analyze multiple factors. Using ADTree, we attempted to construct a prediction model of leukemia relapse within 1 year of transplantation. With the model of training data (n = 148), prediction accuracy, the AUC of ROC, and the κ-statistic value were 78.4%, 0.746, and 0.508, respectively. The false positive rate (FPR) of the relapse prediction was as low as 0.134. In an evaluation of the model with validation data (n = 69), prediction accuracy, AUC, and FPR of the relapse prediction were similar at 71.0%, 0.667, and 0.216, respectively. These results suggest that the model is generalized and highly accurate. Furthermore, the output of ADTree may visualize the branch point of treatment. For example, the selection of donor types resulted in different relapse predictions. Therefore, clinicians may change treatment options by referring to the model, thereby improving outcomes. The present results indicate that ML, such as ADTree, will contribute to the decision-making process in the diversified allo-HSCT field and be useful for preventing the relapse of leukemia.

Identifiants

pubmed: 31305031
doi: 10.1002/cam4.2401
pmc: PMC6718546
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

5058-5067

Informations de copyright

© 2019 The Authors. Cancer Medicine published by John Wiley & Sons Ltd.

Références

Cancer Med. 2019 Sep;8(11):5058-5067
pubmed: 31305031
Bone Marrow Transplant. 2016 Nov;51(11):1431-1438
pubmed: 27295272
JAMA Oncol. 2016 Dec 1;2(12):1583-1589
pubmed: 27532508
Leukemia. 2018 Feb;32(2):492-498
pubmed: 28642591
Br J Haematol. 2019 Mar;184(6):1035-1037
pubmed: 29790152
Lancet Oncol. 2015 Nov;16(15):1525-1536
pubmed: 26429297
Bone Marrow Transplant. 2019 Jun;54(6):798-809
pubmed: 30385870
Biol Blood Marrow Transplant. 2017 Dec;23(12):2192-2198
pubmed: 28864140
J Clin Oncol. 2017 Apr 10;35(11):1154-1161
pubmed: 28380315
Blood. 2014 Jun 5;123(23):3664-71
pubmed: 24744269
Lancet. 2018 Aug 18;392(10147):593-606
pubmed: 30078459
Bone Marrow Transplant. 2014 Mar;49(3):332-7
pubmed: 24096823
JAMA. 2009 Jun 10;301(22):2349-61
pubmed: 19509382
J Clin Oncol. 2014 Oct 10;32(29):3249-56
pubmed: 25154831
Blood. 2005 Oct 15;106(8):2912-9
pubmed: 15994282
J Clin Oncol. 2017 Nov 10;35(32):3678-3687
pubmed: 28892433
J Clin Oncol. 2015 Oct 1;33(28):3144-51
pubmed: 26240227
Bone Marrow Transplant. 2013 Mar;48(3):452-8
pubmed: 23208313
Blood. 2016 May 19;127(20):2391-405
pubmed: 27069254
Blood. 2016 May 19;127(20):2375-90
pubmed: 26980727
J Clin Oncol. 2015 Dec 10;33(35):4167-75
pubmed: 26527780
Haematologica. 2013 May;98(5):814-22
pubmed: 23349300
Biol Blood Marrow Transplant. 2017 Sep;23(9):1417-1421
pubmed: 28606646
Lancet. 2013 Jun 1;381(9881):1943-55
pubmed: 23523389
PLoS One. 2016 Mar 04;11(3):e0150637
pubmed: 26942424
Int J Lab Hematol. 2018 May;40 Suppl 1:46-53
pubmed: 29741258
Bone Marrow Transplant. 2018 Dec;53(12):1498-1507
pubmed: 29795435
N Engl J Med. 2016 Sep 8;375(10):944-53
pubmed: 27602666
Sci Rep. 2017 Aug 7;7(1):7402
pubmed: 28784991

Auteurs

Kyoko Fuse (K)

Faculty of Medicine, Department of Hematology, Endocrinology and Metabolism, Niigata University, Niigata, Japan.

Shun Uemura (S)

Faculty of Medicine, Department of Hematology, Endocrinology and Metabolism, Niigata University, Niigata, Japan.

Suguru Tamura (S)

Faculty of Medicine, Department of Hematology, Endocrinology and Metabolism, Niigata University, Niigata, Japan.

Tatsuya Suwabe (T)

Faculty of Medicine, Department of Hematology, Endocrinology and Metabolism, Niigata University, Niigata, Japan.

Takayuki Katagiri (T)

Faculty of Medicine, Department of Hematology, Endocrinology and Metabolism, Niigata University, Niigata, Japan.

Tomoyuki Tanaka (T)

Faculty of Medicine, Department of Hematology, Endocrinology and Metabolism, Niigata University, Niigata, Japan.

Takashi Ushiki (T)

Faculty of Medicine, Department of Hematology, Endocrinology and Metabolism, Niigata University, Niigata, Japan.

Yasuhiko Shibasaki (Y)

Department of Hematopoietic Cell Transplantation, Niigata University Medical and Dental Hospital, Niigata, Japan.

Naoko Sato (N)

Department of Hematology, Nagaoka Red Cross Hospital, Nagaoka, Japan.

Toshio Yano (T)

Department of Hematology, Nagaoka Red Cross Hospital, Nagaoka, Japan.

Takashi Kuroha (T)

Department of Hematology, Nagaoka Red Cross Hospital, Nagaoka, Japan.

Shigeo Hashimoto (S)

Department of Hematology, Nagaoka Red Cross Hospital, Nagaoka, Japan.

Tatsuo Furukawa (T)

Department of Hematology, Nagaoka Red Cross Hospital, Nagaoka, Japan.

Miwako Narita (M)

Laboratory of Hematology and Oncology, Graduate School of Health Sciences, Niigata University, Niigata, Japan.

Hirohito Sone (H)

Faculty of Medicine, Department of Hematology, Endocrinology and Metabolism, Niigata University, Niigata, Japan.

Masayoshi Masuko (M)

Department of Hematopoietic Cell Transplantation, Niigata University Medical and Dental Hospital, Niigata, Japan.

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