Network analysis of whole-brain fMRI dynamics: A new framework based on dynamic communicability.


Journal

NeuroImage
ISSN: 1095-9572
Titre abrégé: Neuroimage
Pays: United States
ID NLM: 9215515

Informations de publication

Date de publication:
01 11 2019
Historique:
received: 27 01 2019
revised: 04 06 2019
accepted: 09 07 2019
pubmed: 16 7 2019
medline: 28 4 2020
entrez: 16 7 2019
Statut: ppublish

Résumé

Neuroimaging techniques such as MRI have been widely used to explore the associations between brain areas. Structural connectivity (SC) captures the anatomical pathways across the brain and functional connectivity (FC) measures the correlation between the activity of brain regions. These connectivity measures have been much studied using network theory in order to uncover the distributed organization of brain structures, in particular FC for task-specific brain communication. However, the application of network theory to study FC matrices is often "static" despite the dynamic nature of time series obtained from fMRI. The present study aims to overcome this limitation by introducing a network-oriented analysis applied to whole-brain effective connectivity (EC) useful to interpret the brain dynamics. Technically, we tune a multivariate Ornstein-Uhlenbeck (MOU) process to reproduce the statistics of the whole-brain resting-state fMRI signals, which provides estimates for MOU-EC as well as input properties (similar to local excitabilities). The network analysis is then based on the Green function (or network impulse response) that describes the interactions between nodes across time for the estimated dynamics. This model-based approach provides time-dependent graph-like descriptor, named communicability, that characterize the roles that either nodes or connections play in the propagation of activity within the network. They can be used at both global and local levels, and also enables the comparison of estimates from real data with surrogates (e.g. random network or ring lattice). In contrast to classical graph approaches to study SC or FC, our framework stresses the importance of taking the temporal aspect of fMRI signals into account. Our results show a merging of functional communities over time, moving from segregated to global integration of the network activity. Our formalism sets a solid ground for the analysis and interpretation of fMRI data, including task-evoked activity.

Identifiants

pubmed: 31306771
pii: S1053-8119(19)30588-9
doi: 10.1016/j.neuroimage.2019.116007
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

116007

Informations de copyright

Copyright © 2019 Elsevier Inc. All rights reserved.

Auteurs

Matthieu Gilson (M)

Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Carrer de Ramon Trias Fargas 25-27, Barcelona, 08005, Spain. Electronic address: matthieu.gilson@upf.edu.

Nikos E Kouvaris (NE)

Namur Institute for Complex Systems (naXys), Department of Mathematics, University of Namur, Rempart de la Vierge 8, B 5000, Namur, Belgium; DRIBIA Data Research S.L., Barcelona, Spain.

Gustavo Deco (G)

Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Carrer de Ramon Trias Fargas 25-27, Barcelona, 08005, Spain; Institució Catalana de la Recerca i Estudis Avançats (ICREA), Universitat Pompeu Fabra, Passeig Lluís Companys 23, Barcelona, 08010, Spain.

Jean-François Mangin (JF)

Neurospin, CEA, Paris Saclay University, Gif-sur-Yvette, 91191, France.

Cyril Poupon (C)

Neurospin, CEA, Paris Saclay University, Gif-sur-Yvette, 91191, France.

Sandrine Lefranc (S)

Neurospin, CEA, Paris Saclay University, Gif-sur-Yvette, 91191, France.

Denis Rivière (D)

Neurospin, CEA, Paris Saclay University, Gif-sur-Yvette, 91191, France.

Gorka Zamora-López (G)

Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Carrer de Ramon Trias Fargas 25-27, Barcelona, 08005, Spain.

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