Distance-based analysis of variance for brain connectivity.


Journal

Biometrics
ISSN: 1541-0420
Titre abrégé: Biometrics
Pays: United States
ID NLM: 0370625

Informations de publication

Date de publication:
03 2020
Historique:
received: 14 03 2018
accepted: 12 07 2019
pubmed: 28 7 2019
medline: 19 8 2021
entrez: 28 7 2019
Statut: ppublish

Résumé

The field of neuroimaging dedicated to mapping connections in the brain is increasingly being recognized as key for understanding neurodevelopment and pathology. Networks of these connections are quantitatively represented using complex structures, including matrices, functions, and graphs, which require specialized statistical techniques for estimation and inference about developmental and disorder-related changes. Unfortunately, classical statistical testing procedures are not well suited to high-dimensional testing problems. In the context of global or regional tests for differences in neuroimaging data, traditional analysis of variance (ANOVA) is not directly applicable without first summarizing the data into univariate or low-dimensional features, a process that might mask the salient features of high-dimensional distributions. In this work, we consider a general framework for two-sample testing of complex structures by studying generalized within-group and between-group variances based on distances between complex and potentially high-dimensional observations. We derive an asymptotic approximation to the null distribution of the ANOVA test statistic, and conduct simulation studies with scalar and graph outcomes to study finite sample properties of the test. Finally, we apply our test to our motivating study of structural connectivity in autism spectrum disorder.

Identifiants

pubmed: 31350904
doi: 10.1111/biom.13123
pmc: PMC7653688
mid: NIHMS1638086
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

257-269

Subventions

Organisme : NICHD NIH HHS
ID : R01 HD089390
Pays : United States
Organisme : NIH HHS
ID : S10 OD023495
Pays : United States

Informations de copyright

© 2019 The International Biometric Society.

Références

Ann Stat. 2018 Jun;46(3):1109-1137
pubmed: 30344356
Neuroimage. 2014 Jun;93 Pt 1:74-94
pubmed: 24583255
Genetics. 2014 Aug;197(4):1081-95
pubmed: 24831820
Autism Res. 2012 Oct;5(5):289-313
pubmed: 22786754
Proc Natl Acad Sci U S A. 2006 Jun 6;103(23):8577-82
pubmed: 16723398
Biostatistics. 2012 Sep;13(4):762-75
pubmed: 22699862
Inf Process Med Imaging. 2017 Jun;10265:41-52
pubmed: 28943730
Neuroimage Clin. 2014 Aug 15;6:9-19
pubmed: 25379412
Am J Hum Genet. 2007 Feb;80(2):353-60
pubmed: 17236140
Bioinformatics. 2011 Nov 15;27(22):3135-41
pubmed: 21984759
Ann Stat. 2008;36(6):2605-2637
pubmed: 19169416
Neuroimage. 2014 Feb 1;86:544-53
pubmed: 23921101
Dev Cogn Neurosci. 2018 Aug;32:4-7
pubmed: 29051027
J Am Stat Assoc. 2018;114(526):820-830
pubmed: 31548755
Am J Hum Genet. 2008 Feb;82(2):386-97
pubmed: 18252219
Biometrics. 2010 Jun;66(2):636-43
pubmed: 19673867
Am J Hum Genet. 2015 May 7;96(5):797-807
pubmed: 25957468
Neuroimage. 2013 Oct 15;80:62-79
pubmed: 23684880
PLoS Genet. 2009 Feb;5(2):e1000384
pubmed: 19214210
Genet Epidemiol. 2009 Sep;33(6):497-507
pubmed: 19170135
Neuroimage. 2016 Jan 1;124(Pt B):1149-1154
pubmed: 25937488
Magn Reson Med. 2003 Nov;50(5):1077-88
pubmed: 14587019
Natl Sci Rev. 2014 Jun;1(2):293-314
pubmed: 25419469
Biometrics. 2017 Dec;73(4):1453-1463
pubmed: 28295177
Hum Hered. 2010;70(1):42-54
pubmed: 20413981
Am J Hum Genet. 2011 Jul 15;89(1):82-93
pubmed: 21737059
Biostatistics. 2003 Jan;4(1):57-74
pubmed: 12925330
Am J Hum Genet. 2013 Jun 6;92(6):841-53
pubmed: 23684009

Auteurs

Russell T Shinohara (RT)

Department of Biostatistics, Epidemiology, and Informatics, Penn Statistics in Imaging and Visualization Center, University of Pennsylvania, Philadelphia, Pennsylvania.
Department of Radiology, Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.

Haochang Shou (H)

Department of Biostatistics, Epidemiology, and Informatics, Penn Statistics in Imaging and Visualization Center, University of Pennsylvania, Philadelphia, Pennsylvania.
Department of Radiology, Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.

Marco Carone (M)

Department of Biostatistics, University of Washington, Seattle, Washington.

Robert Schultz (R)

Center for Autism Research, The Children's Hospital of Philadelphia, Philadelphia, Pennsylvania.

Birkan Tunc (B)

Department of Radiology, Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.

Drew Parker (D)

Department of Radiology, Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.

Melissa Lynne Martin (ML)

Department of Biostatistics, Epidemiology, and Informatics, Penn Statistics in Imaging and Visualization Center, University of Pennsylvania, Philadelphia, Pennsylvania.

Ragini Verma (R)

Department of Radiology, Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH