The profiles of dysbiotic microbial communities.

bioreactors culturomics gut microbiome metabolomics metagenomics organoids

Journal

AIMS microbiology
ISSN: 2471-1888
Titre abrégé: AIMS Microbiol
Pays: United States
ID NLM: 101697141

Informations de publication

Date de publication:
2019
Historique:
received: 29 11 2018
accepted: 17 03 2019
entrez: 7 8 2019
pubmed: 7 8 2019
medline: 7 8 2019
Statut: epublish

Résumé

Alterations in the human gut microbiota play an important role in disease pathogenesis. Although next-generation sequencing has provided observational evidence linking shifts in gut microbiota composition to alterations in the human host, underlying mechanisms remain elusive. Metabolites generated within complex microbial communities and at the crossroads with host cells may be able to explain the impact of the gut microbiome on human homeostasis. Emerging technologies including novel culturing protocols, microfluidic systems, engineered organoids, and single-cell imaging approaches are providing new perspectives from which the gut microbiome can be studied paving the way to new diagnostic markers and personalized therapeutic interventions.

Identifiants

pubmed: 31384705
doi: 10.3934/microbiol.2019.1.87
pii: microbiol-05-01-087
pmc: PMC6646933
doi:

Types de publication

Journal Article Review

Langues

eng

Pagination

87-101

Déclaration de conflit d'intérêts

Conflict of interest: All authors declare no conflicts of interest in this paper.

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Auteurs

Paola Brun (P)

Department of Molecular Medicine, University of Padova, Padova, Italy.

Classifications MeSH