Detection and segmentation of lymphomas in 3D PET images via clustering with entropy-based optimization strategy.


Journal

International journal of computer assisted radiology and surgery
ISSN: 1861-6429
Titre abrégé: Int J Comput Assist Radiol Surg
Pays: Germany
ID NLM: 101499225

Informations de publication

Date de publication:
Oct 2019
Historique:
received: 12 01 2019
accepted: 05 08 2019
pubmed: 12 8 2019
medline: 22 1 2020
entrez: 12 8 2019
Statut: ppublish

Résumé

Lymphoma detection and segmentation from PET images are critical tasks for cancer staging and treatment monitoring. However, it is still a challenge owing to the complexities of lymphoma PET data themselves, and the huge computational burdens and memory requirements for 3D volume data. In this work, an entropy-based optimization strategy for clustering is proposed to detect and segment lymphomas in 3D PET images. To reduce computational complexity and add more feature information, billions of voxels in 3D volume data are first aggregated into supervoxels. Then, such supervoxels serve as basic data units for further clustering by using DBSCAN algorithm, in which some new feature attributes based on physical spatial information and prior knowledge are proposed. In addition, more importantly, an entropy-based objective function is constructed to search the most appropriate parameters of DBSCAN to obtain the optimal clustering results by using a genetic algorithm. This step allows to automatically adapt the parameters to each patient. Finally, a series of comparison experiments among various feature attributes are performed. 48 patient data are conducted, showing the combination of three features, supervoxel intensity, geographic coordinates and organ distributions, can achieve good performance and the proposed entropy-based optimization scheme has more advantages than the existing methods. The proposed entropy-based optimization strategy for clustering by integrating physical spatial attributes and prior knowledge can achieve better performance than traditional methods.

Identifiants

pubmed: 31401714
doi: 10.1007/s11548-019-02049-2
pii: 10.1007/s11548-019-02049-2
pmc: PMC8191583
mid: NIHMS1709794
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1715-1724

Subventions

Organisme : NCI NIH HHS
ID : R01 CA233873
Pays : United States
Organisme : co-financed by the European Union with the European regional development fund and by the Normandie Regional Council via the MoNoMaD project
ID : 18P03397/18E01937

Références

IEEE Trans Pattern Anal Mach Intell. 2012 Nov;34(11):2274-82
pubmed: 22641706
Comput Med Imaging Graph. 2017 Sep;60:3-10
pubmed: 27955798
J Nucl Med. 2010 Feb;51(2):268-76
pubmed: 20080896
BMC Med Imaging. 2015 Aug 12;15:29
pubmed: 26263899
Phys Med Biol. 2009 Nov 21;54(22):6901-16
pubmed: 19864698
J Nucl Med. 2005 Aug;46(8):1342-8
pubmed: 16085592
IEEE Trans Med Imaging. 2012 Feb;31(2):474-86
pubmed: 21997252
Neuroimage. 2009 Aug 1;47(1):122-35
pubmed: 19345740
J Nucl Med. 1999 Jan;40(1):118-30
pubmed: 9935067
Cancer. 1997 Dec 15;80(12 Suppl):2505-9
pubmed: 9406703
Comput Med Imaging Graph. 2018 Dec;70:1-7
pubmed: 30253305
Int J Radiat Oncol Biol Phys. 2004 Nov 15;60(4):1272-82
pubmed: 15519800

Auteurs

Haigen Hu (H)

University of Rouen Normandy, LITIS EA 4108, 76183, Rouen, France.

Pierre Decazes (P)

CHB Hospital, Rue d'Amiens, CS11516, 76038, Rouen Cedex 1, France.

Pierre Vera (P)

CHB Hospital, Rue d'Amiens, CS11516, 76038, Rouen Cedex 1, France.

Hua Li (H)

Department of Radiation Oncology, Washington University, Saint Louis, MO, 63110, USA.

Su Ruan (S)

University of Rouen Normandy, LITIS EA 4108, 76183, Rouen, France. su.ruan@univ-rouen.fr.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH