Detection and segmentation of lymphomas in 3D PET images via clustering with entropy-based optimization strategy.
3D PET image
Clustering
Entropy-based optimization
Lymphomas detection and segmentation
Supervoxel segmentation
Journal
International journal of computer assisted radiology and surgery
ISSN: 1861-6429
Titre abrégé: Int J Comput Assist Radiol Surg
Pays: Germany
ID NLM: 101499225
Informations de publication
Date de publication:
Oct 2019
Oct 2019
Historique:
received:
12
01
2019
accepted:
05
08
2019
pubmed:
12
8
2019
medline:
22
1
2020
entrez:
12
8
2019
Statut:
ppublish
Résumé
Lymphoma detection and segmentation from PET images are critical tasks for cancer staging and treatment monitoring. However, it is still a challenge owing to the complexities of lymphoma PET data themselves, and the huge computational burdens and memory requirements for 3D volume data. In this work, an entropy-based optimization strategy for clustering is proposed to detect and segment lymphomas in 3D PET images. To reduce computational complexity and add more feature information, billions of voxels in 3D volume data are first aggregated into supervoxels. Then, such supervoxels serve as basic data units for further clustering by using DBSCAN algorithm, in which some new feature attributes based on physical spatial information and prior knowledge are proposed. In addition, more importantly, an entropy-based objective function is constructed to search the most appropriate parameters of DBSCAN to obtain the optimal clustering results by using a genetic algorithm. This step allows to automatically adapt the parameters to each patient. Finally, a series of comparison experiments among various feature attributes are performed. 48 patient data are conducted, showing the combination of three features, supervoxel intensity, geographic coordinates and organ distributions, can achieve good performance and the proposed entropy-based optimization scheme has more advantages than the existing methods. The proposed entropy-based optimization strategy for clustering by integrating physical spatial attributes and prior knowledge can achieve better performance than traditional methods.
Identifiants
pubmed: 31401714
doi: 10.1007/s11548-019-02049-2
pii: 10.1007/s11548-019-02049-2
pmc: PMC8191583
mid: NIHMS1709794
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
1715-1724Subventions
Organisme : NCI NIH HHS
ID : R01 CA233873
Pays : United States
Organisme : co-financed by the European Union with the European regional development fund and by the Normandie Regional Council via the MoNoMaD project
ID : 18P03397/18E01937
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