KRAS-Driven Lung Adenocarcinoma and B Cell Infiltration: Novel Insights for Immunotherapy.

B cells KRAS LUAD immunotherapy tumor microenvironment

Journal

Cancers
ISSN: 2072-6694
Titre abrégé: Cancers (Basel)
Pays: Switzerland
ID NLM: 101526829

Informations de publication

Date de publication:
09 Aug 2019
Historique:
received: 02 07 2019
revised: 01 08 2019
accepted: 06 08 2019
entrez: 14 8 2019
pubmed: 14 8 2019
medline: 14 8 2019
Statut: epublish

Résumé

Non-small-cell lung cancer, histologically classified into adenocarcinoma (AD) and squamous cell carcinoma, is one of the most deadly malignancies worldwide. Lung AD (LUAD) could benefit of a plethora of target therapies and, in the last few years, also of immunotherapies. Here we focused on a real-life cohort of LUAD and The Cancer Genome Atlas (TCGA)-LUAD dataset aiming to gain insights into the immune contexture of such a malignancy. We explored the mutational status of 41 genes and the expression of 94 genes, related to immune-checkpoint, inflammation, and stromal microenvironment. Surprisingly, we found that our cohort has a very low mutational burden if we consider our panel as its surrogate. Regarding gene expression data, we identified 31 genes significantly deregulated in tumor tissues compared with a pool of normal samples. Unsupervised hierarchical clustering of the deregulated genes is able to identify two clusters of tumor samples, differently enriched in alterations in actionable genes. In particular, we identified a cluster enriched in patients carrying

Identifiants

pubmed: 31405063
pii: cancers11081145
doi: 10.3390/cancers11081145
pmc: PMC6721568
pii:
doi:

Types de publication

Journal Article

Langues

eng

Déclaration de conflit d'intérêts

The authors declare no conflict of interest.

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Auteurs

Rosamaria Pinto (R)

Molecular Diagnostics and Pharmacogenetics Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Daniela Petriella (D)

Molecular Diagnostics and Pharmacogenetics Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Rosanna Lacalamita (R)

Molecular Diagnostics and Pharmacogenetics Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Michele Montrone (M)

Medical Thoracic Oncology Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Annamaria Catino (A)

Medical Thoracic Oncology Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Pamela Pizzutilo (P)

Medical Thoracic Oncology Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Maria Antonietta Botticella (MA)

Histopathological Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Francesco Alfredo Zito (FA)

Histopathological Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Gabriella Del Bene (G)

Medical Thoracic Oncology Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Antonia Zonno (A)

Clinical Trial Center, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Stefania Tommasi (S)

Molecular Diagnostics and Pharmacogenetics Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy. s.tommasi@oncologico.bari.it.

Simona De Summa (S)

Molecular Diagnostics and Pharmacogenetics Unit, IRCCS-Istituto Tumori "Giovanni Paolo II", VialeOrazioFlacco 65, 70124 Bari (BA), Italy.

Classifications MeSH