In-house Implementation of Tumor Mutational Burden Testing to Predict Durable Clinical Benefit in Non-small Cell Lung Cancer and Melanoma Patients.

FoundationOne assay Oncomine TML assay immunotherapy lung cancer melanoma tumor mutational burden

Journal

Cancers
ISSN: 2072-6694
Titre abrégé: Cancers (Basel)
Pays: Switzerland
ID NLM: 101526829

Informations de publication

Date de publication:
29 Aug 2019
Historique:
received: 18 07 2019
revised: 13 08 2019
accepted: 28 08 2019
entrez: 1 9 2019
pubmed: 1 9 2019
medline: 1 9 2019
Statut: epublish

Résumé

Tumor mutational burden (TMB) has emerged as an important potential biomarker for prediction of response to immune-checkpoint inhibitors (ICIs), notably in non-small cell lung cancer (NSCLC). However, its in-house assessment in routine clinical practice is currently challenging and validation is urgently needed. We have analyzed sixty NSCLC and thirty-six melanoma patients with ICI treatment, using the FoundationOne test (FO) in addition to in-house testing using the Oncomine TML (OTML) panel and evaluated the durable clinical benefit (DCB), defined by >6 months without progressive disease. Comparison of TMB values obtained by both tests demonstrated a high correlation in NSCLC (

Identifiants

pubmed: 31470674
pii: cancers11091271
doi: 10.3390/cancers11091271
pmc: PMC6769455
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Agence Nationale de la Recherche
ID : ANR-15-IDEX-01
Organisme : Agence Nationale de la Recherche
ID : ANR-11-LABX-0028-01
Organisme : Fondation ARC pour la Recherche sur le Cancer
ID : Canc'air Genexposomics

Déclaration de conflit d'intérêts

Simon Heeke has received honoraria from Qiagen. Michel Poudenx has received honoraria from Roche, BMS, MSD and Pfizer and has been an investigator for Novartis and MSD. Thierry Passeron has received honoraria from Novartis, Roche, BMS, SANOFI and has been an investigator for Novartis, Roche, BMS, MSD, AMGEN, Pierre Fabre and SANOFI. Albrecht Stenzinger has received advisory board honoraria from AstraZeneca, Bayer, BMS, Illumina, Novartis, Seattle Genomics, Takeda, ThermoFisher, speaker’s honoraria from AstraZeneca, Bayer, BMS, Illumina, MSD, Novartis, Roche, Seattle Genomics, Takeda, ThermoFisher as well as research funding from Chugai and BMS. Marius Ilié has received honoraria from Roche, Merck & co, AstraZeneca, BMS and Boehringer Ingelheim. Paul Hofman has received honoraria from Roche, AstraZeneca, BMS, Novartis, Merck, MSD, Qiagen, Thermo Fisher and Biocartis. All other authors have no conflict of interest to declare.

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Auteurs

Simon Heeke (S)

Université Côte d'Azur, 06000 Nice, France.
Team 4, Institute for Research on Cancer and Aging Nice (IRCAN), Institut de la Santé et de le Recherche Médicale (INSERM) U1081/CNRS 7284, 06107 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France.

Jonathan Benzaquen (J)

Université Côte d'Azur, 06000 Nice, France.
Team 4, Institute for Research on Cancer and Aging Nice (IRCAN), Institut de la Santé et de le Recherche Médicale (INSERM) U1081/CNRS 7284, 06107 Nice, France.
Department of Pulmonology and Thoracic Oncology, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Elodie Long-Mira (E)

Université Côte d'Azur, 06000 Nice, France.
Team 4, Institute for Research on Cancer and Aging Nice (IRCAN), Institut de la Santé et de le Recherche Médicale (INSERM) U1081/CNRS 7284, 06107 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France.

Benoit Audelan (B)

Université Côte d'Azur, 06000 Nice, France.
Epione Team, Inria, Sophia Antipolis, 06902 Valbonne, France.

Virginie Lespinet (V)

Université Côte d'Azur, 06000 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Olivier Bordone (O)

Université Côte d'Azur, 06000 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Salomé Lalvée (S)

Université Côte d'Azur, 06000 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Katia Zahaf (K)

Université Côte d'Azur, 06000 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Michel Poudenx (M)

Université Côte d'Azur, 06000 Nice, France.
Department of Oncology, Antoine Lacassagne Comprehensive Cancer Center, 06200 Nice, France.

Olivier Humbert (O)

Université Côte d'Azur, 06000 Nice, France.
Department of Nuclear Medicine, Antoine Lacassagne Comprehensive Cancer Center, 06200 Nice, France.

Henri Montaudié (H)

Université Côte d'Azur, 06000 Nice, France.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France.
Department of Dermatology, Archet II Hospital, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Pierre-Michel Dugourd (PM)

Université Côte d'Azur, 06000 Nice, France.
Department of Dermatology, Archet II Hospital, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Madleen Chassang (M)

Université Côte d'Azur, 06000 Nice, France.
Department of Radiology, Archet 2 Hospital, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Thierry Passeron (T)

Université Côte d'Azur, 06000 Nice, France.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France.
Department of Dermatology, Archet II Hospital, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.
Centre Méditerranéen de Médecine Moléculaire (C3M), Institut de la Santé et de le Recherche Médicale (INSERM) U1065, 06204 Nice, France.

Hervé Delingette (H)

Université Côte d'Azur, 06000 Nice, France.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France.
Epione Team, Inria, Sophia Antipolis, 06902 Valbonne, France.

Charles-Hugo Marquette (CH)

Université Côte d'Azur, 06000 Nice, France.
Team 4, Institute for Research on Cancer and Aging Nice (IRCAN), Institut de la Santé et de le Recherche Médicale (INSERM) U1081/CNRS 7284, 06107 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France.
Department of Pulmonology and Thoracic Oncology, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.

Véronique Hofman (V)

Université Côte d'Azur, 06000 Nice, France.
Team 4, Institute for Research on Cancer and Aging Nice (IRCAN), Institut de la Santé et de le Recherche Médicale (INSERM) U1081/CNRS 7284, 06107 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France.

Albrecht Stenzinger (A)

Institute of Pathology, University Hospital Heidelberg, 69120 Heidelberg, Germany.
Center for Personalized Oncology (DKFZ-HIPO), Deutsches Krebsforschungszentrum (DKFZ), 69120 Heidelberg, Germany.

Marius Ilié (M)

Université Côte d'Azur, 06000 Nice, France.
Team 4, Institute for Research on Cancer and Aging Nice (IRCAN), Institut de la Santé et de le Recherche Médicale (INSERM) U1081/CNRS 7284, 06107 Nice, France.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France.

Paul Hofman (P)

Université Côte d'Azur, 06000 Nice, France. hofman.p@chu-nice.fr.
Team 4, Institute for Research on Cancer and Aging Nice (IRCAN), Institut de la Santé et de le Recherche Médicale (INSERM) U1081/CNRS 7284, 06107 Nice, France. hofman.p@chu-nice.fr.
Laboratory of Clinical and Experimental Pathology, Biobank BB-0033-00025, Centre Hospitalier Universitaire de Nice, 06000 Nice, France. hofman.p@chu-nice.fr.
FHU OncoAge, Pasteur Hospital, 06000 Nice, France. hofman.p@chu-nice.fr.

Classifications MeSH