Comparative Genomic Analysis of the 2016
Vibrio cholerae
cholera
comparative genomics analysis
genome sequencing
molecular epidemiology
Journal
Frontiers in public health
ISSN: 2296-2565
Titre abrégé: Front Public Health
Pays: Switzerland
ID NLM: 101616579
Informations de publication
Date de publication:
2019
2019
Historique:
received:
13
04
2019
accepted:
30
07
2019
entrez:
3
9
2019
pubmed:
3
9
2019
medline:
3
9
2019
Statut:
epublish
Résumé
In August 2016, South Korea experienced a cholera outbreak that caused acute watery diarrhea in three patients. This outbreak was the first time in 15 years that an outbreak was not linked to an overseas source. To identify the cause and to study the epidemiological implications of this outbreak, we sequenced the whole genome of
Identifiants
pubmed: 31475130
doi: 10.3389/fpubh.2019.00228
pmc: PMC6707086
doi:
Types de publication
Journal Article
Langues
eng
Pagination
228Références
J Bacteriol. 2000 Dec;182(24):6992-8
pubmed: 11092860
J Clin Microbiol. 2002 Sep;40(9):3296-9
pubmed: 12202569
Genome Biol. 2004;5(2):R12
pubmed: 14759262
Emerg Infect Dis. 2004 Nov;10(11):2057-9
pubmed: 16010751
Nucleic Acids Res. 2005 Oct 07;33(17):5691-702
pubmed: 16214803
Int J Med Microbiol. 2007 Oct;297(6):443-9
pubmed: 17475554
Emerg Infect Dis. 2008 Jun;14(6):987-8
pubmed: 18507925
Proc Natl Acad Sci U S A. 2009 Sep 8;106(36):15442-7
pubmed: 19720995
Trends Microbiol. 2010 Jan;18(1):46-54
pubmed: 19942436
BMC Bioinformatics. 2010 Mar 08;11:119
pubmed: 20211023
PLoS One. 2010 Mar 10;5(3):e9490
pubmed: 20224823
Emerg Infect Dis. 2010 Jul;16(7):1130-2
pubmed: 20587187
Bioinformatics. 2010 Oct 1;26(19):2460-1
pubmed: 20709691
N Engl J Med. 2011 Jan 6;364(1):33-42
pubmed: 21142692
Nature. 2011 Aug 24;477(7365):462-5
pubmed: 21866102
J Clin Microbiol. 2011 Nov;49(11):3739-49
pubmed: 21880975
J Comput Biol. 2012 May;19(5):455-77
pubmed: 22506599
J Clin Microbiol. 2012 Jul;50(7):2212-6
pubmed: 22518867
Proc Natl Acad Sci U S A. 2012 Jul 17;109(29):E2010-7
pubmed: 22711841
Bioinformatics. 2014 May 1;30(9):1312-3
pubmed: 24451623
MBio. 2015 Apr 21;6(2):null
pubmed: 25900650
Bioinformatics. 2015 Nov 15;31(22):3691-3
pubmed: 26198102
Appl Environ Microbiol. 2015 Oct;81(20):7171-7
pubmed: 26253680
Nucleic Acids Res. 2016 Jan 4;44(D1):D286-93
pubmed: 26582926
Bioinformatics. 2016 Nov 1;32(21):3246-3251
pubmed: 27378296
Nucleic Acids Res. 2017 Jan 4;45(D1):D566-D573
pubmed: 27789705
Nucleic Acids Res. 2017 Jan 4;45(D1):D353-D361
pubmed: 27899662
Int J Syst Evol Microbiol. 2017 May;67(5):1613-1617
pubmed: 28005526
Methods Mol Biol. 2017;1558:41-55
pubmed: 28150232
Int J Syst Evol Microbiol. 2017 Jun;67(6):2053-2057
pubmed: 28639931
Int J Syst Evol Microbiol. 2018 Jan;68(1):461-466
pubmed: 29292687
Am J Trop Med Hyg. 2018 Jul;99(1):168-170
pubmed: 29785923
Lett Appl Microbiol. 2018 Oct;67(4):329-336
pubmed: 29981154
Ann Lab Med. 2019 Nov;39(6):530-536
pubmed: 31240880
Clin Microbiol Rev. 1995 Jan;8(1):48-86
pubmed: 7704895
J Diarrhoeal Dis Res. 1993 Jun;11(2):63-6
pubmed: 8409283