Soft X-ray tomography: virtual sculptures from cell cultures.


Journal

Current opinion in structural biology
ISSN: 1879-033X
Titre abrégé: Curr Opin Struct Biol
Pays: England
ID NLM: 9107784

Informations de publication

Date de publication:
10 2019
Historique:
received: 30 03 2019
revised: 24 06 2019
accepted: 27 06 2019
pubmed: 10 9 2019
medline: 29 7 2020
entrez: 10 9 2019
Statut: ppublish

Résumé

Cellular complexity is represented best in high-spatial resolution, three-dimensional (3D) reconstructions. Soft X-ray tomography (SXT) generates detailed volumetric reconstructions of cells preserved in a near-to-native, frozen-hydrated state. SXT is broadly applicable and can image specimens ranging from bacteria to large mammalian cells. As a reference, we summarize light and electron microscopic methods. We then present an overview of SXT and discuss its role in cellular imaging. We detail the methods used to image biological specimens and present recent highlights that illustrate the capabilities of the technique. We conclude by discussing correlative imaging, specifically the combination of SXT and fluorescence microscopy performed on the same specimen. This correlated approach combines the structural morphology of a cell with its physiological characteristics to build a deeply informative composite view.

Identifiants

pubmed: 31495562
pii: S0959-440X(19)30053-3
doi: 10.1016/j.sbi.2019.06.012
pmc: PMC6791522
mid: NIHMS1539311
pii:
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

324-332

Subventions

Organisme : NIGMS NIH HHS
ID : P41 GM103445
Pays : United States

Informations de copyright

Copyright © 2019 Elsevier Ltd. All rights reserved.

Références

Cell Div. 2018 Jan 25;13:1
pubmed: 29416553
Trends Cell Biol. 2009 Nov;19(11):587-95
pubmed: 19818625
J Struct Biol. 2012 Feb;177(2):212-23
pubmed: 22273540
IUBMB Life. 2009 Nov;61(11):1029-42
pubmed: 19859977
Curr Opin Struct Biol. 2010 Oct;20(5):623-31
pubmed: 20869868
Trends Biochem Sci. 2009 Feb;34(2):60-70
pubmed: 19101147
Acta Trop. 2018 Sep;185:400-411
pubmed: 29932930
J Struct Biol. 2013 Oct;184(1):12-20
pubmed: 23531637
J Synchrotron Radiat. 2014 Nov;21(Pt 6):1370-7
pubmed: 25343808
Mol Biol Cell. 2004 Mar;15(3):957-62
pubmed: 14699066
J Microsc. 2001 Mar;201(Pt 3):395-403
pubmed: 11240856
Nat Cell Biol. 2000 Aug;2(8):E151-2
pubmed: 10934490
Cell Mol Biol (Noisy-le-grand). 2000 Sep;46(6):1045-52
pubmed: 10976862
Adv Anat Embryol Cell Biol. 2016;219:41-67
pubmed: 27207362
Appl Spectrosc. 2011 Sep;65(9):967-80
pubmed: 21929850
Arch Biochem Biophys. 2015 Sep 1;581:111-21
pubmed: 25602704
J Microsc. 1981 Nov;124(Pt 2):107-17
pubmed: 7321023
Ultramicroscopy. 2014 Nov;146:46-54
pubmed: 24973653
Nat Commun. 2014 Sep 04;5:4808
pubmed: 25185801
Microsc Res Tech. 2012 May;75(5):662-6
pubmed: 22505187
J Microsc. 1992 Nov;168(Pt 2):181-201
pubmed: 1464902
Micron. 2008;39(2):190-7
pubmed: 17339116
Biophys J. 2014 Oct 21;107(8):1988-1996
pubmed: 25418180
Mol Cell. 2015 May 21;58(4):644-59
pubmed: 26000849
J Microsc. 2014 Aug;255(2):65-70
pubmed: 24942982
Cell Rep. 2016 Nov 15;17(8):2125-2136
pubmed: 27851973
Opt Lett. 1994 Jun 1;19(11):780-2
pubmed: 19844443
J Struct Biol. 2012 Feb;177(2):193-201
pubmed: 22210307
J Histochem Cytochem. 2001 May;49(5):553-64
pubmed: 11304793
Opt Lett. 2003 Nov 1;28(21):2019-21
pubmed: 14587801
Micron. 2007;38(4):390-401
pubmed: 16990007
J Struct Biol. 2013 Jan;181(1):77-81
pubmed: 23079478
Trends Cell Biol. 2011 Dec;21(12):682-91
pubmed: 22047760
Methods Mol Biol. 2013;950:457-81
pubmed: 23086890
J Struct Biol. 2009 Jul;167(1):1-10
pubmed: 19358891
Annu Rev Phys Chem. 2012;63:225-39
pubmed: 22242730
Chem Soc Rev. 2009 Oct;38(10):2887-921
pubmed: 19771335
Nat Methods. 2010 Dec;7(12):985-7
pubmed: 21076419
Mol Reprod Dev. 2015 Jul-Aug;82(7-8):502-7
pubmed: 25226877
Ultramicroscopy. 2000 Aug;84(3-4):185-97
pubmed: 10945329
Protoplasma. 2014 Mar;251(2):449-58
pubmed: 24264466
J Synchrotron Radiat. 2014 May;21(Pt 3):627-32
pubmed: 24763654
J Cell Sci. 2015 Aug 1;128(15):2795-804
pubmed: 26101352
Histochem Cell Biol. 1995 Aug;104(2):97-137
pubmed: 8536077
Biol Cell. 2011 Sep;103(9):405-20
pubmed: 21812762
Proc Natl Acad Sci U S A. 2005 Sep 13;102(37):13081-6
pubmed: 16141335
Biol Cell. 2017 Jan;109(1):24-38
pubmed: 27690365
Sci Rep. 2017 Jun 16;7(1):3692
pubmed: 28623258
J Cell Sci. 2018 Jan 30;131(3):
pubmed: 29382699
J Struct Biol. 2012 Feb;177(2):179-92
pubmed: 22155291
J Cell Biochem. 2014 Feb;115(2):209-16
pubmed: 23966233
Biotechniques. 2001 Nov;31(5):1076-8, 1080, 1082 passim
pubmed: 11730015
Annu Rev Biochem. 2005;74:833-65
pubmed: 15952904
J Struct Biol. 2018 Oct;204(1):9-18
pubmed: 29908247
Ultramicroscopy. 2014 Aug;143:77-87
pubmed: 24238600
Methods Cell Biol. 2009;91:81-7
pubmed: 20409781
Trends Cell Biol. 1999 Feb;9(2):81-5
pubmed: 10087625
Trends Cell Biol. 2018 Jun;28(6):420-435
pubmed: 29602697
Cell Struct Funct. 2002 Oct;27(5):335-41
pubmed: 12502887
Curr Opin Chem Biol. 2014 Jun;20:86-91
pubmed: 24951858
Science. 2006 Sep 15;313(5793):1642-5
pubmed: 16902090
Bioessays. 2012 Apr;34(4):320-7
pubmed: 22290620
Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7889-7898
pubmed: 30926670
Nat Methods. 2006 Oct;3(10):793-5
pubmed: 16896339
J Microsc. 2010 Oct;240(1):14-20
pubmed: 21050209
J Struct Biol. 2009 Nov;168(2):234-9
pubmed: 19616103
Plant Cell. 2019 Mar;31(3):579-601
pubmed: 30787178
Nature. 2005 Jun 30;435(7046):1210-3
pubmed: 15988520
Curr Opin Struct Biol. 2005 Oct;15(5):593-600
pubmed: 16153818
J Cell Biol. 2010 Jul 26;190(2):165-75
pubmed: 20643879
Folia Histochem Cytobiol. 2014;52(1):1-17
pubmed: 24802956
Q Rev Biophys. 2016 Jan;49:e13
pubmed: 27658821
Biol Cell. 2017 Feb;109(2):81-93
pubmed: 27730650
Ultramicroscopy. 2014 Aug;143:33-40
pubmed: 24355261

Auteurs

Jessica Guo (J)

Department of Anatomy, School of Medicine, University of California San Francisco, San Francisco, CA 94158, United States; National Center for X-ray Tomography, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.

Carolyn A Larabell (CA)

Department of Anatomy, School of Medicine, University of California San Francisco, San Francisco, CA 94158, United States; Molecular Biophysics and Integrated Bioimaging, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States; National Center for X-ray Tomography, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States. Electronic address: Carolyn.Larabell@ucsf.edu.

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Classifications MeSH