The Pathobiome in Animal and Plant Diseases.

disease microbiome pathobiome pathobiotic symbiome symbiont

Journal

Trends in ecology & evolution
ISSN: 1872-8383
Titre abrégé: Trends Ecol Evol
Pays: England
ID NLM: 8805125

Informations de publication

Date de publication:
11 2019
Historique:
received: 30 01 2019
revised: 14 07 2019
accepted: 23 07 2019
pubmed: 17 9 2019
medline: 18 12 2019
entrez: 17 9 2019
Statut: ppublish

Résumé

A growing awareness of the diversity and ubiquity of microbes (eukaryotes, prokaryotes, and viruses) associated with larger 'host' organisms has led to the realisation that many diseases thought to be caused by one primary agent are the result of interactions between multiple taxa and the host. Even where a primary agent can be identified, its effect is often moderated by other symbionts. Therefore, the one pathogen-one disease paradigm is shifting towards the pathobiome concept, integrating the interaction of multiple symbionts, host, and environment in a new understanding of disease aetiology. Taxonomically, pathobiomes are variable across host species, ecology, tissue type, and time. Therefore, a more functionally driven understanding of pathobiotic systems is necessary, based on gene expression, metabolic interactions, and ecological processes.

Identifiants

pubmed: 31522755
pii: S0169-5347(19)30224-1
doi: 10.1016/j.tree.2019.07.012
pmc: PMC7479508
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

996-1008

Informations de copyright

Crown Copyright © 2019. Published by Elsevier Ltd. All rights reserved.

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Auteurs

David Bass (D)

Centre for Environment, Fisheries and Aquaculture Science (CEFAS), Barrack Road, The Nothe, Weymouth, DT4 8UB, UK; Sustainable Aquaculture Futures, University of Exeter, Exeter, EX4 4QD, UK; Department of Life Sciences, The Natural History Museum, Cromwell Road, London, SW7 5BD, UK. Electronic address: david.bass@cefas.co.uk.

Grant D Stentiford (GD)

Centre for Environment, Fisheries and Aquaculture Science (CEFAS), Barrack Road, The Nothe, Weymouth, DT4 8UB, UK; Sustainable Aquaculture Futures, University of Exeter, Exeter, EX4 4QD, UK.

Han-Ching Wang (HC)

Department of Biotechnology and Bioindustry Sciences, National Cheng Kung University, Tainan, 70101, Taiwan; International Center for Scientific Development of Shrimp Aquaculture, National Cheng Kung University, Tainan, 70101, Taiwan.

Britt Koskella (B)

Department of Integrative Biology, University of California, Berkeley, CA 94720, USA.

Charles R Tyler (CR)

Sustainable Aquaculture Futures, University of Exeter, Exeter, EX4 4QD, UK; Biosciences, University of Exeter, Stocker Road, Exeter, EX4 4HB, UK.

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Classifications MeSH