DisCVR: Rapid viral diagnosis from high-throughput sequencing data.
diagnosis
high-throughput sequencing
k-mer
virus
Journal
Virus evolution
ISSN: 2057-1577
Titre abrégé: Virus Evol
Pays: England
ID NLM: 101664675
Informations de publication
Date de publication:
Jul 2019
Jul 2019
Historique:
entrez:
19
9
2019
pubmed:
19
9
2019
medline:
19
9
2019
Statut:
epublish
Résumé
High-throughput sequencing (HTS) enables most pathogens in a clinical sample to be detected from a single analysis, thereby providing novel opportunities for diagnosis, surveillance, and epidemiology. However, this powerful technology is difficult to apply in diagnostic laboratories because of its computational and bioinformatic demands. We have developed DisCVR, which detects known human viruses in clinical samples by matching sample
Identifiants
pubmed: 31528358
doi: 10.1093/ve/vez033
pii: vez033
pmc: PMC6735924
doi:
Types de publication
Journal Article
Langues
eng
Pagination
vez033Subventions
Organisme : Medical Research Council
ID : MC_UU_12014/12
Pays : United Kingdom
Organisme : Medical Research Council
ID : MC_UU_12014/9
Pays : United Kingdom
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