Plasma metabolites associated with homeostatic model assessment of insulin resistance: metabolite-model design and external validation.
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
25 09 2019
25 09 2019
Historique:
received:
24
01
2019
accepted:
27
08
2019
entrez:
27
9
2019
pubmed:
27
9
2019
medline:
28
10
2020
Statut:
epublish
Résumé
Different plasma metabolites have been related to insulin resistance (IR). However, there is a lack of metabolite models predicting IR with external validation. The aim of this study is to identify a multi-metabolite model associated to the homeostatic model assessment (HOMA)-IR values. We performed a cross-sectional metabolomics analysis of samples collected from overweight and obese subjects from two independent studies. The training step was performed in 236 subjects from the SATIN study and validated in 102 subjects from the GLYNDIET study. Plasma metabolomics profile was analyzed using three different approaches: GC/quadrupole-TOF, LC/quadrupole-TOF, and nuclear magnetic resonance (NMR). Associations between metabolites and HOMA-IR were assessed using elastic net regression analysis with a leave-one-out cross validation (CV) and 100 CV runs. HOMA-IR was analyzed both as linear and categorical (median or lower versus higher than the median). Receiver operating characteristic curves were constructed based on metabolites' weighted models. A set of 30 metabolites discriminating extremes of HOMA-IR were consistently selected. These metabolites comprised some amino acids, lipid species and different organic acids. The area under the curve (AUC) for the discrimination between HOMA-IR extreme categories was 0.82 (95% CI: 0.74-0.90), based on the multi-metabolite model weighted with the regression coefficients of metabolites in the validation dataset. We identified a set of metabolites discriminating between extremes of HOMA-IR and able to predict HOMA-IR with high accuracy.
Identifiants
pubmed: 31554919
doi: 10.1038/s41598-019-50260-7
pii: 10.1038/s41598-019-50260-7
pmc: PMC6761105
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
13895Références
Mediators Inflamm. 2016;2016:6456018
pubmed: 28077918
Free Radic Biol Med. 1994 Oct;17(4):367-72
pubmed: 8001841
Curr Opin Endocrinol Diabetes Obes. 2011 Apr;18(2):139-43
pubmed: 21297467
Mol Nutr Food Res. 2018 Mar;62(6):e1700756
pubmed: 29377510
Diabetes Care. 2004 Sep;27(9):2166-71
pubmed: 15333479
Bioinformatics. 2012 Jan 1;28(1):112-8
pubmed: 22039212
Toxins (Basel). 2016 Oct 13;8(10):
pubmed: 27754382
Am J Clin Nutr. 2018 Jul 1;108(1):13-23
pubmed: 29878058
J Proteome Res. 2010 May 7;9(5):2527-38
pubmed: 20402505
Int J Obes (Lond). 2017 Sep;41(9):1369-1378
pubmed: 28529327
Diabetes Obes Metab. 2008 Mar;10(3):223-8
pubmed: 18269637
N Engl J Med. 1969 Oct 9;281(15):811-6
pubmed: 5809519
Endocrine. 2017 Dec;58(3):553-562
pubmed: 29075976
J Clin Invest. 2011 Apr;121(4):1402-11
pubmed: 21403394
BMJ. 1995 Oct 28;311(7013):1124-7
pubmed: 7580706
J Biol Chem. 2005 Jul 22;280(29):26649-52
pubmed: 15929991
Diabetes Care. 2003 May;26(5):1362-8
pubmed: 12716789
J Stat Softw. 2010;33(1):1-22
pubmed: 20808728
Mol Nutr Food Res. 2019 Jan;63(1):e1700975
pubmed: 29603657
Lipids Health Dis. 2015 Aug 26;14:96
pubmed: 26302954
Annu Rev Med. 2013;64:291-305
pubmed: 23327524
J Lipid Res. 2010 Aug;51(8):2422-7
pubmed: 20436182
J Lipid Res. 2004 Mar;45(3):507-12
pubmed: 14657199
BMC Genomics. 2006 Jun 08;7:142
pubmed: 16762068
Diabetologia. 2009 Jan;52(1):97-105
pubmed: 18985315
Diabetes. 2012 Jun;61(6):1372-80
pubmed: 22511205
Int J Circumpolar Health. 2010 Sep;69(4):344-51
pubmed: 20719107
Nutr Diabetes. 2014 Sep 01;4:e133
pubmed: 25177913
Metabolism. 1968 Aug;17(8):690-701
pubmed: 5676215
BMC Bioinformatics. 2011 Mar 17;12:77
pubmed: 21414208
Cell Metab. 2009 Apr;9(4):311-26
pubmed: 19356713
Diabetes Care. 2013 Mar;36(3):648-55
pubmed: 23129134
Cell Metab. 2017 Jan 10;25(1):43-56
pubmed: 28094011
Biochem J. 1996 Aug 15;318 ( Pt 1):85-92
pubmed: 8761456
J Diabetes Investig. 2015 Jul;6(4):408-15
pubmed: 26221519
PLoS One. 2014 Apr 16;9(4):e95008
pubmed: 24740143
Am J Clin Nutr. 2004 Oct;80(4):887-95
pubmed: 15447895
Nature. 2006 Dec 14;444(7121):840-6
pubmed: 17167471
Int J Circumpolar Health. 2017;76(1):1310444
pubmed: 28406758
Diabetologia. 1985 Jul;28(7):412-9
pubmed: 3899825
Am J Clin Nutr. 2003 Jul;78(1):91-8
pubmed: 12816776
Int J Epidemiol. 2010 Dec;39(6):1647-55
pubmed: 20797988
Sci Rep. 2018 May 29;8(1):8207
pubmed: 29844477