Circular RNA profiling in the oocyte and cumulus cells reveals that circARMC4 is essential for porcine oocyte maturation.
circular RNA
cumulus cells
meiotic maturation
oocytes
pig
Journal
Aging
ISSN: 1945-4589
Titre abrégé: Aging (Albany NY)
Pays: United States
ID NLM: 101508617
Informations de publication
Date de publication:
28 09 2019
28 09 2019
Historique:
received:
31
03
2019
accepted:
21
09
2019
pubmed:
29
9
2019
medline:
9
9
2020
entrez:
29
9
2019
Statut:
ppublish
Résumé
Thousands of circular RNAs (circRNAs) have been recently discovered in cumulus cells and oocytes from several species. However, the expression and function of circRNA during porcine oocyte meiotic maturation have been never examined. Here, we separately identified 7,067 and 637 circRNAs in both cumulus cells and oocytes via deep sequencing and bioinformatic analysis. Further analysis revealed that a faction of circRNAs is differentially expressed (DE) in a developmental stage-specific manner. The host genes of DE circRNAs are markedly enriched to multiple signaling pathways associated with cumulus cell function and oocyte maturation. Additionally, most DE circRNAs harbor several miRNA targets, suggesting that these DE circRNAs potentially act as miRNA sponge. Importantly, we found that maternal
Identifiants
pubmed: 31562810
pii: 102315
doi: 10.18632/aging.102315
pmc: PMC6781969
doi:
Substances chimiques
RNA, Circular
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
8015-8034Références
Stem Cell Res Ther. 2018 Mar 9;9(1):56
pubmed: 29523209
PLoS Genet. 2018 Sep 10;14(9):e1007593
pubmed: 30199527
RNA Biol. 2016 Oct 2;13(10):1011-1024
pubmed: 27560004
Adv Exp Med Biol. 2018;1087:81-94
pubmed: 30259359
BMC Genomics. 2019 Jan 30;20(1):96
pubmed: 30700247
Hum Reprod Update. 2018 May 1;24(3):245-266
pubmed: 29432538
Genome Biol. 2016 Jun 17;17(1):130
pubmed: 27315811
Int J Mol Sci. 2014 May 26;15(6):9331-42
pubmed: 24865493
Genomics. 2019 Jul;111(4):598-606
pubmed: 29709513
Nat Rev Mol Cell Biol. 2001 Dec;2(12):887-97
pubmed: 11733768
J Vet Med Sci. 2002 Sep;64(9):803-6
pubmed: 12399605
Genome Biol. 2015 Jul 23;16:148
pubmed: 26201400
R Soc Open Sci. 2018 Jul 25;5(7):180413
pubmed: 30109096
J Reprod Dev. 2003 Oct;49(5):347-59
pubmed: 14967910
Reprod Fertil Dev. 2017 Sep;29(10):1902-1909
pubmed: 27938625
Mol Reprod Dev. 2015 Dec;82(12):932-56
pubmed: 26517592
Methods Mol Biol. 2014;1071:109-28
pubmed: 24052384
Biol Reprod. 2010 Jun;82(6):1190-7
pubmed: 20200212
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):E5796-E5804
pubmed: 28673989
Dev Biol. 2016 Aug 1;416(1):18-25
pubmed: 27287880
J Biol Chem. 2009 Feb 27;284(9):5731-41
pubmed: 19073608
RNA. 2014 Dec;20(12):1829-42
pubmed: 25404635
Hum Reprod Update. 2008 Mar-Apr;14(2):159-77
pubmed: 18175787
Anim Reprod Sci. 2018 Dec;199:1-14
pubmed: 30449707
Reprod Biol Endocrinol. 2016 Apr 16;14:21
pubmed: 27084064
Nat Commun. 2018 Dec 14;9(1):5318
pubmed: 30552320
Gene. 2013 Dec 1;531(2):294-300
pubmed: 24055424
Genomics. 2017 Oct 26;:null
pubmed: 29107014
Biol Reprod. 2004 May;70(5):1493-9
pubmed: 14736813
DNA Res. 2017 Oct 1;24(5):523-535
pubmed: 28575165
Anim Reprod Sci. 2004 Jul;82-83:431-46
pubmed: 15271471
J Biotechnol. 2016 Nov 20;238:42-51
pubmed: 27671698
Cell. 2019 Feb 7;176(4):869-881.e13
pubmed: 30735636
Theriogenology. 2012 Oct 1;78(6):1350-60
pubmed: 22898011
Wiley Interdiscip Rev RNA. 2016 Jan-Feb;7(1):71-89
pubmed: 26596258
Genome Biol. 2015 Nov 05;16:245
pubmed: 26541409
Biol Reprod. 2017 Oct 1;97(4):537-549
pubmed: 29025011
Theriogenology. 2001 Apr 1;55(6):1291-301
pubmed: 11327685
Domest Anim Endocrinol. 2008 May;34(4):360-71
pubmed: 18023131
PLoS One. 2017 Jun 23;12(6):e0177888
pubmed: 28644873
PLoS Genet. 2017 Jan 10;13(1):e1006535
pubmed: 28072828
Curr Biol. 2010 Feb 9;20(3):271-7
pubmed: 20116247
Biochem Biophys Res Commun. 2018 Apr 15;498(4):743-750
pubmed: 29526755
Aging (Albany NY). 2018 Sep 23;10(9):2511-2534
pubmed: 30260796
Soc Reprod Fertil Suppl. 2009;66:165-76
pubmed: 19848279
Mech Dev. 2017 Feb;143:20-25
pubmed: 28039065
Genes Dev. 2012 Nov 15;26(22):2550-9
pubmed: 23154985
Sci Rep. 2016 Dec 13;6:39080
pubmed: 27958373
Sci Rep. 2018 May 21;8(1):7944
pubmed: 29786687
Am J Physiol Endocrinol Metab. 2015 Mar 15;308(6):E525-34
pubmed: 25628423
Cell Cycle. 2014;13(21):3390-403
pubmed: 25485583
Theriogenology. 2016 Jul 1;86(1):62-8
pubmed: 27160446
Nat Commun. 2017 Oct 27;8(1):1149
pubmed: 29074849
Oncotarget. 2017 Apr 18;8(16):26573-26590
pubmed: 28404936